RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 OPN1MW2P0DN77 364 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 OPN1MW3P0DN78 364 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 CD247P20963 164 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 MSR1P21757 451 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 STX1BP61266 288 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 NPTX1Q15818 432 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 KRT71Q3SY84 523 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 SAMD5Q5TGI4 173 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 LYPD2Q6UXB3 125 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 Q6ZTK2 550 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 SLC30A8Q8IWU4 369 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 PDZD9Q8IXQ8 264 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 ZSCAN4Q8NAM6 433 aaPredicted RBP9.69□□□□□ -0.86
CDK9-205ENST00000498339 C19orf18Q8NEA5 215 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 PFN4Q8NHR9 129 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDK9-205ENST00000498339 MPP4Q96JB8 637 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 RBP7Q96R05 134 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 RASSF4Q9H2L5 321 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 CENPHQ9H3R5 247 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 TBCCD1Q9NVR7 557 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 PTTG3PQ9NZH4 202 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 CORO2BQ9UQ03 480 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 FAM96BQ9Y3D0 163 aa9.69□□□□□ -0.86
CDK9-205ENST00000498339 ELOVL7A1L3X0 281 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 EVPLLA8MZ36 301 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 ZNF879B4DU55 563 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 THY1P04216 161 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 HOXB9P17482 250 aaPredicted RBP9.68□□□□□ -0.86
CDK9-205ENST00000498339 FUT1P19526 365 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 TUBG1P23258 451 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 IER3P46695 156 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 LOXL3P58215 753 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 SCRN3Q0VDG4 424 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 ARMC4Q5T2S8 1044 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 KPRPQ5T749 579 aaPredicted RBP9.68□□□□□ -0.86
CDK9-205ENST00000498339 CD276Q5ZPR3 534 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 DCDC5Q6ZRR9 648 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 RBM45Q8IUH3 476 aaKnown RBP9.68□□□□□ -0.86
CDK9-205ENST00000498339 MSRB3Q8IXL7 192 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 CLDN22Q8N7P3 220 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 ANKRD42Q8N9B4 389 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 BHLHE23Q8NDY6 225 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 MOSPD2Q8NHP6 518 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 SGCDQ92629 289 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 HAVCR1Q96D42 359 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 SGTBQ96EQ0 304 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 COG8Q96MW5 612 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 WDFY2Q96P53 400 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 TBX15Q96SF7 602 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 TMEM38AQ9H6F2 299 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 MEPEQ9NQ76 525 aaPredicted RBP9.68□□□□□ -0.86
CDK9-205ENST00000498339 TUBG2Q9NRH3 451 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 STARD10Q9Y365 291 aa9.68□□□□□ -0.86
CDK9-205ENST00000498339 ZNF816-ZNF321PA0A0X1KG74 233 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 ANKRD61A6NGH8 418 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 F5H5P2 479 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 SGCEO43556 437 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 LYPD3O95274 346 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 MT-ND1P03886 318 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 NPY4RP50391 375 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 DBPQ10586 325 aaPredicted RBP9.67□□□□□ -0.86
CDK9-205ENST00000498339 ENDOGQ14249 297 aaKnown RBP9.67□□□□□ -0.86
CDK9-205ENST00000498339 DUSP7Q16829 419 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 CYP51A1Q16850 503 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 VAX1Q5SQQ9 334 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 LRIF1Q5T3J3 769 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 OR2T2Q6IF00 324 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 SLC25A47Q6Q0C1 308 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 LDLRAD3Q86YD5 345 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 C11orf44Q8N8P7 122 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 PNLDC1Q8NA58 520 aaKnown RBP9.67□□□□□ -0.86
CDK9-205ENST00000498339 C11orf65Q8NCR3 313 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 GPR32P1Q8NGA4 272 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 OR11L1Q8NGX0 322 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 OR13G1Q8NGZ3 307 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 SLC26A7Q8TE54 656 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 PTP4A1Q93096 173 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 PPP1R14AQ96A00 147 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 NMD3Q96D46 503 aaKnown RBP9.67□□□□□ -0.86
CDK9-205ENST00000498339 ZNF582Q96NG8 517 aaPredicted RBP9.67□□□□□ -0.86
CDK9-205ENST00000498339 OR52B2Q96RD2 323 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 ALG12Q9BV10 488 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 TXNIPQ9H3M7 391 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 C16orf95Q9H693 158 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 EMC7Q9NPA0 242 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 THAP1Q9NVV9 213 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 VAPAQ9P0L0 249 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 SLAMF8Q9P0V8 285 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 ERVK-18Q9QC07 812 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 TMCC3Q9ULS5 477 aa9.67□□□□□ -0.86
CDK9-205ENST00000498339 DNAH3Q8TD57 4116 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 LIPFP07098 398 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 VSIG8P0DPA2 414 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 COX5BP10606 129 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 RAC2P15153 192 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 TAS2R41P59536 307 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 HERPUD1Q15011 391 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 ZNF181Q2M3W8 571 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 ALG10Q5BKT4 473 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms