RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CCDC92Q53HC0 331 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-227ENST00000498056 ELFN2Q5R3F8 820 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 LRRN1Q6UXK5 716 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 SSX8Q7RTT4 187 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 SSX6Q7RTT6 188 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 ZNF584Q8IVC4 421 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 DMRTC2Q8IXT2 367 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-227ENST00000498056 ALDH16A1Q8IZ83 802 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 STX19Q8N4C7 294 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 SLC30A7Q8NEW0 376 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 OR10S1Q8NGN2 331 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 DACH2Q96NX9 599 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 MNTQ99583 582 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 CNOT2Q9NZN8 540 aaKnown RBP11.8□□□□□ -0.52
CPNE1-227ENST00000498056 BLOC1S6Q9UL45 172 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 LRCH1Q9Y2L9 728 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 PCDHGB1Q9Y5G3 927 aa11.8□□□□□ -0.52
CPNE1-227ENST00000498056 A0A1W2PQL4 384 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-227ENST00000498056 DAPL1A0PJW8 107 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 SYNGR3O43761 229 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 PTHP01270 115 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 IGHA1P01876 353 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 H2BFMP0C1H6 154 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 CCDC159P0C7I6 412 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 OR2T7P0C7T2 308 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 PIPP12273 146 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-227ENST00000498056 CCL2P13500 99 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 COX6B1P14854 86 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 MYL12AP19105 171 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 EEF1B2P24534 225 aaKnown RBP11.79□□□□□ -0.52
CPNE1-227ENST00000498056 STOMP27105 288 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 SLC15A1P46059 708 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 GDI2P50395 445 aaKnown RBP11.79□□□□□ -0.52
CPNE1-227ENST00000498056 HIST1H3AP68431 136 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 SPOCK1Q08629 439 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 RBM48Q5RL73 367 aaKnown RBP11.79□□□□□ -0.52
CPNE1-227ENST00000498056 C1QTNF12Q5T7M4 302 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 HIST2H3PS2Q5TEC6 136 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 KCTD18Q6PI47 426 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-227ENST00000498056 ZNF322Q6U7Q0 402 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-227ENST00000498056 TMEM108Q6UXF1 575 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 HIST2H3AQ71DI3 136 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 FAM220AQ7Z4H9 259 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 KRT77Q7Z794 578 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 ACBD7Q8N6N7 88 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 CPEB3Q8NE35 698 aaKnown RBP11.79□□□□□ -0.52
CPNE1-227ENST00000498056 OR2T27Q8NH04 317 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 OR1F12Q8NHA8 337 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 SLC7A6Q92536 515 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 GGHQ92820 318 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 PIK3IP1Q96FE7 263 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 OR51B6Q9H340 312 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 CDH20Q9HBT6 801 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 PNRC2Q9NPJ4 139 aaKnown RBP11.79□□□□□ -0.52
CPNE1-227ENST00000498056 PAK1IP1Q9NWT1 392 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-227ENST00000498056 PSORS1C1Q9UIG5 152 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 EXOGQ9Y2C4 368 aaKnown RBP11.79□□□□□ -0.52
CPNE1-227ENST00000498056 MYRFQ9Y2G1 1151 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 TPRKBQ9Y3C4 175 aa11.79□□□□□ -0.52
CPNE1-227ENST00000498056 FASNP49327 2511 aaKnown RBP11.79□□□□□ -0.52
CPNE1-227ENST00000498056 PLCE1Q9P212 2302 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-227ENST00000498056 C5orf49A4QMS7 147 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 OR6C6A6NF89 314 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 PRR32B1ATL7 298 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 PTGES3LE9PB15 166 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 IGLV1-44P01699 117 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 SERPINA5P05154 406 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 DBHP09172 617 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 ALOX5APP20292 161 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 CRYGSP22914 178 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 PAX7P23759 505 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 CRHBPP24387 322 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 SLC6A9P48067 706 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 CSNK2BP67870 215 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 GALK2Q01415 458 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 ZNF85Q03923 595 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 BSPH1Q075Z2 132 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 ST3GAL4Q11206 333 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 BEX5Q5H9J7 111 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 ADAM5Q6NVV9 412 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 PIAS4Q8N2W9 510 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-227ENST00000498056 FAM222BQ8WU58 562 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 SNX33Q8WV41 574 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 RNF133Q8WVZ7 376 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 ASB17Q8WXJ9 295 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 SGCDQ92629 289 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 PLPPR2Q96GM1 343 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 TMEM80Q96HE8 168 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 ZNF75AQ96N20 296 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 OR8B4Q96RC9 309 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 COQ7Q99807 217 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 ALG8Q9BVK2 526 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 ESRP2Q9H6T0 727 aaKnown RBP11.78□□□□□ -0.52
CPNE1-227ENST00000498056 PLCXD1Q9NUJ7 323 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 DDX28Q9NUL7 540 aaKnown RBP11.78□□□□□ -0.52
CPNE1-227ENST00000498056 CRNNQ9UBG3 495 aaPredicted RBP11.78□□□□□ -0.52
CPNE1-227ENST00000498056 ATPIF1Q9UII2 106 aa11.78□□□□□ -0.52
CPNE1-227ENST00000498056 DIMT1Q9UNQ2 313 aaKnown RBP11.78□□□□□ -0.52
CPNE1-227ENST00000498056 EXOSC1Q9Y3B2 195 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms