RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ZNF829Q3KNS6 432 aaPredicted RBP1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 KLF17Q5JT82 389 aaPredicted RBP1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 LY6G6FQ5SQ64 297 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 FAM72AQ5TYM5 149 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 C9orf135Q5VTT2 229 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 FAM219BQ5XKK7 198 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 FAM72DQ6L9T8 149 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 UFSP1Q6NVU6 142 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 RFWD3Q6PCD5 774 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 GDPD4Q6W3E5 623 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 UTS2BQ765I0 119 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 GDPD3Q7L5L3 318 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 PRSS48Q7RTY5 328 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 FAM122BQ7Z309 247 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 PTAR1Q7Z6K3 402 aaPredicted RBP1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 COMTD1Q86VU5 262 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 FAM72BQ86X60 149 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 NUDCD3Q8IVD9 361 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 MMAAQ8IVH4 418 aaKnown RBP1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 C9orf40Q8IXQ3 194 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 MS4A15Q8N5U1 240 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 DNAAF3Q8N9W5 541 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 CSNK1G2-AS1Q8NCQ2 148 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 NUP37Q8NFH4 326 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 FDCSPQ8NFU4 85 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 OR4A4PQ8NGN8 299 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 FAM76AQ8TAV0 307 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 C11orf45Q8TAV5 145 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 GTF3AQ92664 365 aaKnown RBP1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 UFD1Q92890 307 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 TADA1Q96BN2 335 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 ASB9Q96DX5 294 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 C9orf72Q96LT7 481 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 ZNF641Q96N77 438 aaPredicted RBP1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 FOXN4Q96NZ1 517 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 XPO6Q96QU8 1125 aaKnown RBP1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 PANX2Q96RD6 677 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 CLCC1Q96S66 551 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 DDA1Q9BW61 102 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 NUDT9Q9BW91 350 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 TM2D1Q9BX74 207 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 TEKT3Q9BXF9 490 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 ING2Q9H160 280 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 LHX5Q9H2C1 402 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 PPA2Q9H2U2 334 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 NXF3Q9H4D5 531 aaKnown RBP1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 REEP4Q9H6H4 257 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 LY9Q9HBG7 655 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 ABCC13Q9NSE7 274 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 WARS2Q9UGM6 360 aaKnown RBP1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 STK38LQ9Y2H1 464 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 AUP1Q9Y679 476 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 SAR1BQ9Y6B6 198 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 HCFC1P51610 2035 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 DNAH7Q8WXX0 4024 aa1.93□□□□□ -2.1
CKS1BP2-201ENST00000497342 PRR14LQ5THK1 2151 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 IGLV4-3A0A075B6K6 122 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 TRAV6A0A075B6T7 132 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 TRAV19A0A0A6YYK7 116 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 A0A1W2PRD5 423 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 OR5B21A6NL26 309 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 EPM2AB3EWF7 344 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 E7ESA3 106 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 SLC9A3R1O14745 358 aaPredicted RBP1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 HUS1O60921 280 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 CBR3O75828 277 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 ATP5LO75964 103 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 HLA-HP01893 362 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 ATP1A1P05023 1023 aaKnown RBP1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 ALPLP05186 524 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 C2P06681 752 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 UMPSP11172 480 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 HMGA1P17096 107 aaKnown RBP1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 CTRB1P17538 263 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 ATF6P18850 670 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 LMO2P25791 158 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 PDHA2P29803 388 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 PPP2R1BP30154 601 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 CX3CR1P49238 355 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 SSR4P51571 173 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 CCNHP51946 323 aaPredicted RBP1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 GPX6P59796 221 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 ERVFC1-1P60608 527 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 YWHAEP62258 255 aaKnown RBP1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 MRPS22P82650 360 aaKnown RBP1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 MRPS11P82912 194 aaKnown RBP1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 PAX2Q02962 417 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 TFF3Q07654 80 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 ST3GAL3Q11203 375 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 CALCOCO2Q13137 446 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 SLAQ13239 276 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 OR5I1Q13606 314 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 CAPRIN1Q14444 709 aaKnown RBP1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 KCNJ11Q14654 390 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 FASTKD3Q14CZ7 662 aaKnown RBP1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 STK38Q15208 465 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 RBBP5Q15291 538 aaKnown RBP1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 LTB4RQ15722 352 aa1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 USF2Q15853 346 aaPredicted RBP1.92□□□□□ -2.1
CKS1BP2-201ENST00000497342 AANATQ16613 207 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms