RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 MYL9P24844 172 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 GDF1P27539 372 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 GABRR2P28476 465 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CCKARP32238 428 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CCKBRP32239 447 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 BRS3P32247 399 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 BIDP55957 195 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 RIPPLY3P57055 190 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ERVFC1-1P60608 527 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ADORA2A-AS1P86434 159 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 HYAL1Q12794 435 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ITPK1Q13572 414 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 FGFBP1Q14512 234 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF235Q14590 738 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF585BQ52M93 769 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CRB2Q5IJ48 1285 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 NHLRC3Q5JS37 347 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 LDLRAD2Q5SZI1 272 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 SP5Q6BEB4 398 aaPredicted RBP2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CBLN3Q6UW01 205 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 PCSK4Q6UW60 755 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 UQCC3Q6UW78 93 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 KIRREL2Q6UWL6 708 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 C19orf35Q6ZS72 473 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 LRRC55Q6ZSA7 311 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 GLT6D1Q7Z4J2 308 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 IRF2BP2Q7Z5L9 587 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 LDLRAD3Q86YD5 345 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 LAX1Q8IWV1 398 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 PDZD9Q8IXQ8 264 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 C11orf44Q8N8P7 122 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 OR1P1Q8NH06 330 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ABHD5Q8WTS1 349 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CLEC4CQ8WTT0 213 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 SKA2Q8WVK7 121 aaPredicted RBP2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ASB13Q8WXK3 278 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 HIST1H2BAQ96A08 127 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 YIPF6Q96EC8 236 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CCDC126Q96EE4 140 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 AURKBQ96GD4 344 aaPredicted RBP2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 SMARCD1Q96GM5 515 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ZC3HAV1LQ96H79 300 aaKnown RBP2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF582Q96NG8 517 aaPredicted RBP2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 OR7D2Q96RA2 312 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 F2RL3Q96RI0 385 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 NDC1Q9BTX1 674 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CIPCQ9C0C6 399 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 TKTL2Q9H0I9 626 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 MFSD1Q9H3U5 465 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 Q9N2K0 584 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 LANCL2Q9NS86 450 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 BABAM1Q9NWV8 329 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 PSG8Q9UQ74 426 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 EXOSC1Q9Y3B2 195 aaKnown RBP2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 NFASCO94856 1347 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 MYH1P12882 1939 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CD109Q6YHK3 1445 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 TRAV30A0A087WSZ9 112 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 TRAV39A0A0B4J263 110 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 IGHV2-70DA0A0C4DH43 119 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 NKX2-6A6NCS4 301 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 SMIM9A6NGZ8 99 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 C21orf140B9A014 251 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 F5H768 121 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CORTO00230 105 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 DHHO43323 396 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 FCGR3BO75015 233 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 OR2J3O76001 311 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ANXA9O76027 345 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 VENTXO95231 258 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC25A27O95847 323 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 PMP2P02689 132 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 FABP3P05413 133 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CST2P09228 141 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 OR56A5P0C7T3 313 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 PPIAL4GP0DN37 164 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 HGFP14210 728 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ZBTB25P24278 435 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CHRNB4P30926 498 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 TIA1P31483 386 aaKnown RBP eCLIP2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 WNT3AP56704 352 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 PIGPP57054 158 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 GNG3P63215 75 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CXADRP78310 365 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 PSG6Q00889 435 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 PSG5Q15238 335 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 LRRC26Q2I0M4 334 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 MESTQ5EB52 335 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 C6orf226Q5I0X4 101 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 FAM78BQ5VT40 261 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 AWAT2Q6E213 333 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 OR4A47Q6IF82 309 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 CAPN13Q6MZZ7 669 aaPredicted RBP2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF621Q6ZSS3 439 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF367Q7RTV3 350 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 DEFB128Q7Z7B8 93 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 LAS2Q8IYD9 372 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 H1FOOQ8IZA3 346 aaPredicted RBP2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC5A8Q8N695 610 aa2.76□□□□□ -1.97
SNRNP48-202ENST00000496946 METTL13Q8N6R0 699 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms