RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 LOC101059948A0A1B0GTJ6 334 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 SULT2B1O00204 365 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 P2RY10O00398 339 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 FABP7O15540 132 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 SSNA1O43805 119 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 DOK2O60496 412 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 RBBP9O75884 186 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 ALDOBP05062 364 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 CSF1P09603 554 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 SULT1A3P0DMM9 295 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 SULT1A4P0DMN0 295 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 CCL3P10147 92 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 CD37P11049 281 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 ZNF43P17038 809 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 FAUP35544 74 aaKnown RBP11.61□□□□□ -0.55
GARNL3-220ENST00000496711 VEGFCP49767 419 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 ADGRE4PQ86SQ3 457 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 OR51A2Q8NGJ7 313 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 OR10S1Q8NGN2 331 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 TAS2R8Q9NYW2 309 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 ING4Q9UNL4 249 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 POLR1DQ9Y2S0 133 aa11.61□□□□□ -0.55
GARNL3-220ENST00000496711 TRAV18A0A075B6X5 111 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 A0A1B0GUH1 482 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 LOC102725191A0A1B0GVB3 256 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 B4E171 279 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 ZNF878C9JN71 531 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 ARPC1BO15143 372 aaKnown RBP11.6□□□□□ -0.55
GARNL3-220ENST00000496711 KDM4BO94953 1096 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 PMS2P2O95744 297 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 TGM6O95932 706 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 TTRP02766 147 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 ACSM4P0C7M7 580 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 TSPAN7P41732 249 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 PCGF3Q3KNV8 242 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 LINC00303Q3SY05 128 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 GLYATL3Q5SZD4 288 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 CARD17Q5XLA6 110 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 FAAP20Q6NZ36 180 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 SLC25A47Q6Q0C1 308 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 CFAP77Q6ZQR2 320 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 LUZP2Q86TE4 346 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 BIVMQ86UB2 503 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 BEST4Q8NFU0 473 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 OR2AJ1Q8NGZ0 328 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 PAQR8Q8TEZ7 354 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 NKX3-1Q99801 234 aaPredicted RBP11.6□□□□□ -0.55
GARNL3-220ENST00000496711 ATG5Q9H1Y0 275 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 OR10A4Q9H209 315 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 CDCP1Q9H5V8 836 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 MOB1AQ9H8S9 216 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 SEC61A2Q9H9S3 476 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 BEX1Q9HBH7 125 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 ZNF160Q9HCG1 818 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 CGGBP1Q9UFW8 167 aaPredicted RBP11.6□□□□□ -0.55
GARNL3-220ENST00000496711 GDF2Q9UK05 429 aaPredicted RBP11.6□□□□□ -0.55
GARNL3-220ENST00000496711 FLVCR2Q9UPI3 526 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 LHFPL6Q9Y693 200 aa11.6□□□□□ -0.55
GARNL3-220ENST00000496711 MEIKINA0A087WXM9 373 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 A0A1B0GVI7 797 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 LOC390937A0A1W2PQ73 354 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 LMX1BO60663 402 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 RAMP1O60894 148 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 NDUFB6O95139 128 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 IGHEP01854 428 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 LIFP15018 202 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 CXCL3P19876 107 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 S100A1P23297 94 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 ACP1P24666 158 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 DSCR4P56555 118 aaPredicted RBP11.59□□□□□ -0.55
GARNL3-220ENST00000496711 PSMA6P60900 246 aaKnown RBP11.59□□□□□ -0.55
GARNL3-220ENST00000496711 SPOCK1Q08629 439 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 ANGPT1Q15389 498 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 METTL11BQ5VVY1 283 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 TMPPEQ6ZT21 453 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 ELMOD2Q8IZ81 293 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 JAGN1Q8N5M9 183 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 TMEM156Q8N614 296 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 GRPEL2Q8TAA5 225 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 PBOV1Q9GZY1 135 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 SMOC1Q9H4F8 434 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 RANBP3Q9H6Z4 567 aaPredicted RBP11.59□□□□□ -0.55
GARNL3-220ENST00000496711 TMEM165Q9HC07 324 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 SH2D2AQ9NP31 389 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 PTTG3PQ9NZH4 202 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 DKKL1Q9UK85 242 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 DCDC2BA2VCK2 349 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 ZNF726A6NNF4 738 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 NR2C1P13056 603 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 GABRA1P14867 456 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 KLK2P20151 261 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 HSD11B1P28845 292 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 PRSS3P35030 304 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 MLF1P58340 268 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 SSBP1Q04837 148 aaKnown RBP11.59□□□□□ -0.55
GARNL3-220ENST00000496711 LPAL2Q16609 132 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 HIST3H3Q16695 136 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 C1orf100Q5SVJ3 147 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 RAET1LQ5VY80 246 aa11.59□□□□□ -0.55
GARNL3-220ENST00000496711 LAMTOR1Q6IAA8 161 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms