RNA–Protein interactions for RNA: ENST00000496627.5

GCOM1-212, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 2,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-212ENST00000496627 RALGAPA1Q6GYQ0 2036 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 A0A0A6YYH2 397 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 A6NJ64 397 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 B3GALNT1O75752 331 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 OR4E1P0C645 316 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 ACSM4P0C7M7 580 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 UBCP0CG48 685 aaKnown RBP13.17□□□□□ -0.3
GCOM1-212ENST00000496627 GLB1P16278 677 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 COL19A1Q14993 1142 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 ALKAL2Q6UX46 152 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 PRSS42Q7Z5A4 293 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 NKAIN3Q8N8D7 197 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 STT3BQ8TCJ2 826 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 DDIT4LQ96D03 193 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 KCNK17Q96T54 332 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 SLC25A21Q9BQT8 299 aaPredicted RBP13.17□□□□□ -0.3
GCOM1-212ENST00000496627 ALX4Q9H161 411 aaPredicted RBP13.17□□□□□ -0.3
GCOM1-212ENST00000496627 CHRDQ9H2X0 955 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 ZMAT3Q9HA38 289 aaKnown RBP13.17□□□□□ -0.3
GCOM1-212ENST00000496627 MED29Q9NX70 200 aa13.17□□□□□ -0.3
GCOM1-212ENST00000496627 PHF3Q92576 2039 aaKnown RBP13.17□□□□□ -0.3
GCOM1-212ENST00000496627 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 ZNF736B4DX44 427 aaPredicted RBP13.16□□□□□ -0.3
GCOM1-212ENST00000496627 LMX1BO60663 402 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 AQP8O94778 261 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 MELTFP08582 738 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 POU3F2P20265 443 aaPredicted RBP13.16□□□□□ -0.3
GCOM1-212ENST00000496627 APOBEC1P41238 236 aaKnown RBP13.16□□□□□ -0.3
GCOM1-212ENST00000496627 HSF1Q00613 529 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 B3GNTL1Q67FW5 361 aaPredicted RBP13.16□□□□□ -0.3
GCOM1-212ENST00000496627 CORO6Q6QEF8 472 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 COX15Q7KZN9 410 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 KMT5CQ86Y97 462 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 C12orf45Q8N5I9 185 aaPredicted RBP13.16□□□□□ -0.3
GCOM1-212ENST00000496627 OR10H5Q8NGA6 315 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 COQ8AQ8NI60 647 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 SCARB1Q8WTV0 552 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 ASB13Q8WXK3 278 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 NKD1Q969G9 470 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 B3GNT4Q9C0J1 378 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 C1orf198Q9H425 327 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 SEMA5BQ9P283 1151 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 SPEF1Q9Y4P9 236 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 ADAMTS9Q9P2N4 1935 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 LOC101059948A0A1B0GTJ6 334 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 LDLRAD4O15165 306 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 SORDQ00796 357 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 FOXF1Q12946 379 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 GK2Q14410 553 aaPredicted RBP13.16□□□□□ -0.3
GCOM1-212ENST00000496627 MOGAT2Q3SYC2 334 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 C1orf100Q5SVJ3 147 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 TMEM65Q6PI78 240 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 DEGS2Q6QHC5 323 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 ARSKQ6UWY0 536 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 GSG1LQ6UXU4 331 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 ZNF584Q8IVC4 421 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.16□□□□□ -0.3
GCOM1-212ENST00000496627 ACBD4Q8NC06 268 aa13.16□□□□□ -0.3
GCOM1-212ENST00000496627 FARSAQ9Y285 508 aaKnown RBP13.16□□□□□ -0.3
GCOM1-212ENST00000496627 IGKV1D-43A0A0B4J1Z2 117 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 TMEM235A6NFC5 223 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 H3BUI4 141 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 ALOX12BO75342 701 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 CD37P11049 281 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 GNALP38405 381 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 EIF1AXP47813 144 aaKnown RBP13.15□□□□□ -0.3
GCOM1-212ENST00000496627 CAPZA1P52907 286 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 SUMO3P55854 103 aaPredicted RBP13.15□□□□□ -0.3
GCOM1-212ENST00000496627 PCK2Q16822 640 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 SCGB2B2Q4G0G5 96 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 KLHL24Q6TFL4 600 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 WDFY1Q8IWB7 410 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 BPIFB2Q8N4F0 458 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 OR4D6Q8NGJ1 314 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 FOXRED1Q96CU9 486 aaPredicted RBP13.15□□□□□ -0.3
GCOM1-212ENST00000496627 NUDT22Q9BRQ3 303 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 SDHAF2Q9NX18 166 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 KLK13Q9UKR3 277 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 SRPK3Q9UPE1 567 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 SESN1Q9Y6P5 492 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 LOC390937A0A1W2PQ73 354 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 METTL21EPA6NDL7 271 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 VSTM2BA6NLU5 285 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 H3BML4 177 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 ZNF354AO60765 605 aaPredicted RBP13.15□□□□□ -0.3
GCOM1-212ENST00000496627 HEXBP07686 556 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 ZNF28P17035 718 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 NAGAP17050 411 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 IGFBP4P22692 258 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 BDKRB2P30411 391 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 ANKRD37Q7Z713 158 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 NAXDQ8IW45 347 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 SLC38A6Q8IZM9 456 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 APCDD1LQ8NCL9 501 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 RNF133Q8WVZ7 376 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 PTX4Q96A99 478 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 FGGYQ96C11 551 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 SLC22A11Q9NSA0 550 aa13.15□□□□□ -0.3
GCOM1-212ENST00000496627 NPIPB13A6NJU9 1138 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms