RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 TRAPPC2BP0DI82 140 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 HOXB6P17509 224 aaKnown RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 FBLP22087 321 aaKnown RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 SSTR2P30874 369 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 CEACAM8P31997 349 aaPredicted RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 CEBPDP49716 269 aaPredicted RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 CDC42P60953 191 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 NCS1P62166 190 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 ARL6IP1Q15041 203 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 FAM74A1Q5RGS3 127 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 NCMAPQ5T1S8 102 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 WDR74Q6RFH5 385 aaPredicted RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 COX15Q7KZN9 410 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 BHLHA15Q7RTS1 189 aaPredicted RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 C9orf40Q8IXQ3 194 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 RNF113BQ8IZP6 322 aaKnown RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 STPG2Q8N412 459 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 POMGNT2Q8NAT1 580 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 NLGN4YQ8NFZ3 816 aaPredicted RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 MRGPRDQ8TDS7 321 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 GLYATL2Q8WU03 294 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 SLC7A6Q92536 515 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 AP3S1Q92572 193 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 POP5Q969H6 163 aaKnown RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 FKBP10Q96AY3 582 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 SAMD8Q96LT4 415 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 GGACTQ9BVM4 153 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 HINT2Q9BX68 163 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 RAB33BQ9H082 229 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 CSTL1Q9H114 145 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF430Q9H8G1 570 aaPredicted RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 MED20Q9H944 212 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 Q9N2J8 555 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 SCN3BQ9NY72 215 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 PSORS1C1Q9UIG5 152 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 A0A075B6Q4 140 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 A0A1B0GWA3 101 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 LNP1A1A4G5 178 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 IDSB3KWA1 339 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 M0QZK8 103 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 REM1O75628 298 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 SOX30O94993 753 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 SERPINA5P05154 406 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 GYPBP06028 91 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 DBIP07108 87 aaKnown RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 PAX6P26367 422 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 GIFP27352 417 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 GTF2E2P29084 291 aaKnown RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 GRK5P34947 590 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 ALDH3B1P43353 468 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 P2RY14Q15391 338 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 SF3A2Q15428 464 aaKnown RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 NR0B2Q15466 257 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 BAK1Q16611 211 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 RNF151Q2KHN1 245 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF181Q2M3W8 571 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 ALG10BQ5I7T1 473 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 XP32Q5T750 250 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 PRAMEF5Q5TYX0 476 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 PRAMEF6Q5VXH4 476 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 OTPQ5XKR4 325 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 BICRALQ6AI39 1079 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 KIRREL2Q6UWL6 708 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 CASP12Q6UXS9 341 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 LINC00299Q6ZSB3 139 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 WDR5BQ86VZ2 330 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 STX19Q8N4C7 294 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 OR2C3Q8N628 320 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 FAM169BQ8N8A8 192 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 CYB561A3Q8NBI2 242 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 OR51L1Q8NGJ5 315 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 OR4Q3Q8NH05 313 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF721Q8TF20 911 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 RORBQ92753 470 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 NINJ1Q92982 152 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 PSMG3-AS1Q96PY0 264 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 CD180Q99467 661 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 STACQ99469 402 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 RNF2Q99496 336 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF2Q9BSG1 426 aaPredicted RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 DUSP23Q9BVJ7 150 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 TSSK6Q9BXA6 273 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 HCAR1Q9BXC0 346 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 FBXO8Q9NRD0 319 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 PARPBPQ9NWS1 579 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 SLCO1C1Q9NYB5 712 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 CALML5Q9NZT1 146 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 GSKIPQ9P0R6 139 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 OPN4Q9UHM6 478 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 TPRKBQ9Y3C4 175 aa5.55□□□□□ -1.52
SSBP1-213ENST00000496622 DSPP15924 2871 aaKnown RBP5.55□□□□□ -1.52
SSBP1-213ENST00000496622 RELNP78509 3460 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 MYO9AB2RTY4 2548 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 IGKV3D-11A0A0A0MRZ8 115 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF99A8MXY4 864 aaPredicted RBP5.54□□□□□ -1.52
SSBP1-213ENST00000496622 ACOT7O00154 380 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 SYT5O00445 386 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 SSX4O60224 188 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 ICOSLGO75144 302 aa5.54□□□□□ -1.52
SSBP1-213ENST00000496622 AK1P00568 194 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms