RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 PPP2R2BQ00005 443 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 TNK1Q13470 666 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 CRMP1Q14194 572 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 PTGES3Q15185 160 aaKnown RBP14.1□□□□□ -0.15
SF3A1-209ENST00000496189 KCNMB1Q16558 191 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 ZNF362Q5T0B9 420 aaPredicted RBP14.1□□□□□ -0.15
SF3A1-209ENST00000496189 ACSM5Q6NUN0 579 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.1□□□□□ -0.15
SF3A1-209ENST00000496189 NEU4Q8WWR8 484 aaPredicted RBP14.1□□□□□ -0.15
SF3A1-209ENST00000496189 FAM168AQ92567 244 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 EME1Q96AY2 570 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 OTULINQ96BN8 352 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 COX4I2Q96KJ9 171 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 POM121L2Q96KW2 1035 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 COG8Q96MW5 612 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 CIB1Q99828 191 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 MRPL37Q9BZE1 423 aaKnown RBP14.1□□□□□ -0.15
SF3A1-209ENST00000496189 PRR23D1E9PI22 279 aaPredicted RBP14.09□□□□□ -0.15
SF3A1-209ENST00000496189 DCTN6O00399 190 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 SURF4O15260 269 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 MITFO75030 526 aaPredicted RBP14.09□□□□□ -0.15
SF3A1-209ENST00000496189 ABHD16AO95870 558 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 PRR23D2P0DMB1 279 aaPredicted RBP14.09□□□□□ -0.15
SF3A1-209ENST00000496189 PDLIM4P50479 330 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 SNAPC1Q16533 368 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 CARTPTQ16568 116 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 ZNF718Q3SXZ3 478 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 UGT2A3Q6UWM9 527 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 ZBTB49Q6ZSB9 765 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 PAQR4Q8N4S7 273 aaPredicted RBP14.09□□□□□ -0.15
SF3A1-209ENST00000496189 ABHD4Q8TB40 342 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 C4orf45Q96LM5 186 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 SORCS2Q96PQ0 1159 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 DDOQ99489 341 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 DOK1Q99704 481 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 FN3KQ9H479 309 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 DLL4Q9NR61 685 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 USE1Q9NZ43 259 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 ATPIF1Q9UII2 106 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 TMEFF2Q9UIK5 374 aaPredicted RBP14.09□□□□□ -0.15
SF3A1-209ENST00000496189 KCNG2Q9UJ96 466 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 FZR1Q9UM11 496 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 MED13LQ71F56 2210 aa14.09□□□□□ -0.15
SF3A1-209ENST00000496189 LOC100509620A0A075B734 347 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 EI24O14681 340 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 ALPLP05186 524 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 SCG5P05408 212 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 ADRA2AP08913 450 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 SLC25A16P16260 332 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 TUBG1P23258 451 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 FMO3P31513 532 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 RGS6P49758 472 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 TEKQ02763 1124 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 RCN1Q15293 331 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 TMEM236Q5W0B7 351 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 TMEM154Q6P9G4 183 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 CBR4Q8N4T8 237 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 ZNF525Q8N782 197 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 SLC26A10Q8NG04 563 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 OR9Q1Q8NGQ5 310 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 IPCEF1Q8WWN9 437 aaPredicted RBP14.08□□□□□ -0.16
SF3A1-209ENST00000496189 PIMREGQ9BSJ6 248 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 GABARAPL3Q9BY60 117 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 REG4Q9BYZ8 158 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 HDHD2Q9H0R4 259 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 RIBC2Q9H4K1 309 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 TUBG2Q9NRH3 451 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 TVP23BQ9NYZ1 205 aa14.08□□□□□ -0.16
SF3A1-209ENST00000496189 PLSCR5A0PG75 271 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 OR6C6A6NF89 314 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 RNF223E7ERA6 249 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 H3BSA7 217 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 NDUFS8O00217 210 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 MPZL1O95297 269 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 GAAP10253 952 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 ANPEPP15144 967 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 ZNF250P15622 560 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 SPI1P17947 270 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 PYCR1P32322 319 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 CLEC9AQ6UXN8 241 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 VASH1Q7L8A9 365 aaPredicted RBP14.07□□□□□ -0.16
SF3A1-209ENST00000496189 ZNF540Q8NDQ6 660 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 OR6K6Q8NGW6 343 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 OR1F12Q8NHA8 337 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 DCLRE1CQ96SD1 692 aaKnown RBP14.07□□□□□ -0.16
SF3A1-209ENST00000496189 NMNAT2Q9BZQ4 307 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 DCLRE1BQ9H816 532 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 C8orf4Q9NR00 106 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 TAAR3PQ9P1P4 343 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 GRIP1Q9Y3R0 1128 aa14.07□□□□□ -0.16
SF3A1-209ENST00000496189 FLNAP21333 2647 aaKnown RBP14.07□□□□□ -0.16
SF3A1-209ENST00000496189 VPS13CQ709C8 3753 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 LOC390937A0A1W2PQ73 354 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 TMEM129A0AVI4 362 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 ZAR1LA6NP61 321 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 H0YHG0 523 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 PRODHO43272 600 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 PPP1CBP62140 327 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 ELF3P78545 371 aaPredicted RBP14.06□□□□□ -0.16
SF3A1-209ENST00000496189 ECH1Q13011 328 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms