RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 RFX4Q33E94 735 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 TMEM255AQ5JRV8 349 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 DNM1P34Q6PK57 102 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 RINLQ6ZS11 566 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 PEG10Q86TG7 708 aaKnown RBP10.82□□□□□ -0.68
PTPRF-214ENST00000496043 PGAM4Q8N0Y7 254 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 OR1F12Q8NHA8 337 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 HAVCR1Q96D42 359 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 CMBLQ96DG6 245 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 ERMAPQ96PL5 475 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-214ENST00000496043 DCLRE1CQ96SD1 692 aaKnown RBP10.82□□□□□ -0.68
PTPRF-214ENST00000496043 GPA33Q99795 319 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 MSL2Q9HCI7 577 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 SRA1Q9HD15 236 aaKnown RBP10.82□□□□□ -0.68
PTPRF-214ENST00000496043 NDE1Q9NXR1 346 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 ASH2LQ9UBL3 628 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 PURGQ9UJV8 347 aaKnown RBP10.82□□□□□ -0.68
PTPRF-214ENST00000496043 TMCC3Q9ULS5 477 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 ARL2BPQ9Y2Y0 163 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 CACNG2Q9Y698 323 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 V9GYQ6 96 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 PLPP2O43688 288 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 OR10H3O60404 316 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 UBOX5O94941 541 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 RENP00797 406 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 SEMG1P04279 462 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 KITLGP21583 273 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 TNFSF4P23510 183 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 SLC6A6P31641 620 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 RGS6P49758 472 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 FXYD6P3P58550 94 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 GNGT1P63211 74 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 TNFAIP6P98066 277 aaPredicted RBP10.81□□□□□ -0.68
PTPRF-214ENST00000496043 SRSF2Q01130 221 aaKnown RBP10.81□□□□□ -0.68
PTPRF-214ENST00000496043 SCGB2A2Q13296 93 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 SPATS1Q496A3 300 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 CCDC92Q53HC0 331 aaPredicted RBP10.81□□□□□ -0.68
PTPRF-214ENST00000496043 C1orf94Q6P1W5 598 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 PGM2L1Q6PCE3 622 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 C16orf89Q6UX73 402 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 PTCHD4Q6ZW05 846 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 PIGWQ7Z7B1 504 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 TEX29Q8N6K0 151 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 GJC3Q8NFK1 279 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 OR5L1Q8NGL2 311 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 GNPDA2Q8TDQ7 276 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 C19orf24Q9BVV8 132 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 OCEL1Q9H607 264 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 METTL17Q9H7H0 456 aaPredicted RBP10.81□□□□□ -0.68
PTPRF-214ENST00000496043 ARL8BQ9NVJ2 186 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 B9D1Q9UPM9 204 aa10.81□□□□□ -0.68
PTPRF-214ENST00000496043 MXRA5Q9NR99 2828 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 OR6C6A6NF89 314 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 ARPC3O15145 178 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 RER1O15258 196 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 IDH3BO43837 385 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 DCTN3O75935 186 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 PPP1R3DO95685 299 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 IGHV2-5P01817 119 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 FABP3P05413 133 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 RAC2P15153 192 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 TNFRSF1AP19438 455 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 FPR3P25089 353 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 MNAT1P51948 309 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 MXRA7P84157 204 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 SLC36A3Q495N2 470 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 OTPQ5XKR4 325 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 LEG1Q6P5S2 330 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 SHQ1Q6PI26 577 aaKnown RBP10.8□□□□□ -0.68
PTPRF-214ENST00000496043 JAZF1Q86VZ6 243 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 SLC7A6Q92536 515 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 SAMD8Q96LT4 415 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 TSSK2Q96PF2 358 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 GAL3ST1Q99999 423 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 IFT27Q9BW83 186 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 OR52D1Q9H346 318 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 POFUT1Q9H488 388 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 IL1RAPQ9NPH3 570 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 ATPIF1Q9UII2 106 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 POLR1DQ9Y2S0 133 aa10.8□□□□□ -0.68
PTPRF-214ENST00000496043 A0A0A6YYJ9 748 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 ISPDA4D126 451 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 J3QW42 95 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 ARPC2O15144 300 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 SURF4O15260 269 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 DEAF1O75398 565 aaPredicted RBP10.79□□□□□ -0.68
PTPRF-214ENST00000496043 KRT36O76013 467 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 PNPP00491 289 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 SBK2P0C263 348 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 NOS3P29474 1203 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 RRM2P31350 389 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 GYS2P54840 703 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 HIST1H3AP68431 136 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 HIST2H3PS2Q5TEC6 136 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 SLC27A4Q6P1M0 643 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 HIST2H3AQ71DI3 136 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.79□□□□□ -0.68
PTPRF-214ENST00000496043 ZDHHC21Q8IVQ6 265 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 DEFB107AQ8IZN7 70 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 OR6V1Q8N148 313 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms