RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ZNHIT3Q15649 155 aaPredicted RBP3.63□□□□□ -1.83
VPS52-222ENST00000495981 NRF1Q16656 503 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 ANKDD1AQ495B1 522 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 XKR7Q5GH72 579 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 LIPNQ5VXI9 398 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 CLEC6AQ6EIG7 209 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 NOXRED1Q6NXP6 359 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 C3orf33Q6P1S2 294 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 SYT10Q6XYQ8 523 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 FCRLAQ7L513 359 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 BHLHA15Q7RTS1 189 aaPredicted RBP3.63□□□□□ -1.83
VPS52-222ENST00000495981 COMMD2Q86X83 199 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 KDM8Q8N371 416 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 GBGT1Q8N5D6 347 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 COX18Q8N8Q8 333 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 CDRT4Q8N9R6 151 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 C10orf105Q8TEF2 133 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 CDS1Q92903 461 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 ZMYND19Q96E35 227 aaPredicted RBP3.63□□□□□ -1.83
VPS52-222ENST00000495981 TXNDC15Q96J42 360 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 TSSK3Q96PN8 268 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 TNFRSF13CQ96RJ3 184 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 STACQ99469 402 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 TRMOQ9BU70 441 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 EML4Q9HC35 981 aaKnown RBP3.63□□□□□ -1.83
VPS52-222ENST00000495981 UBQLN4Q9NRR5 601 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 PCDHGB1Q9Y5G3 927 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 DMRT1Q9Y5R6 373 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 SLC25A15Q9Y619 301 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 A0A087WUV0 522 aaPredicted RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 ZNF724A8MTY0 619 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 E7EQL1 145 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 SCAMP2O15127 329 aaKnown RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 RIPK2O43353 540 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 SPRY3O43610 288 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 TCF21O43680 179 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 KIAA0513O60268 411 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 RBMXL2O75526 392 aaKnown RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 CRCPO75575 148 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 RAD51DO75771 328 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 HMGN2P05204 90 aaKnown RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 CHRNGP07510 517 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 SNRPAP09012 282 aaKnown RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 IGHV4-30-4P0DP06 118 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 PRPS2P11908 318 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 FUT1P19526 365 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 EFNA1P20827 205 aaPredicted RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 ARRB2P32121 409 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 EIF1P41567 113 aaKnown RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 ASMTP46597 345 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 NPBWR1P48145 328 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 AMTP48728 403 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 P2RX1P51575 399 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 FOXG1P55316 489 aaPredicted RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 ISL1P61371 349 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 CKAP4Q07065 602 aaKnown RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 C2orf80Q0P641 193 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 RASGEF1BQ0VAM2 473 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 QPRTQ15274 297 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 STK11Q15831 433 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 VPS26BQ4G0F5 336 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 PHLDA2Q53GA4 152 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 TIMM23BQ5SRD1 257 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 DCST2Q5T1A1 773 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 CLEC2AQ6UVW9 174 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 SIGLEC15Q6ZMC9 328 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 Q6ZSR9 355 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 ADCK1Q86TW2 530 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 ANKRD46Q86W74 232 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 PTOV1Q86YD1 416 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 SLC22A9Q8IVM8 553 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 MMD2Q8IY49 270 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 LRRC17Q8N6Y2 441 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 ZNF433Q8N7K0 673 aaPredicted RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 CEP112Q8N8E3 955 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 TMEM185AQ8NFB2 350 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 CLHC1Q8NHS4 586 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 MPLKIPQ8TAP9 179 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 GPR151Q8TDV0 419 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 DDB2Q92466 427 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 HSD17B8Q92506 261 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 OSTF1Q92882 214 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 PHF21AQ96BD5 680 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 PPCDCQ96CD2 204 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 C16orf58Q96GQ5 468 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 FAM71F1Q96KD3 344 aaPredicted RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 PRRG4Q9BZD6 226 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 LRMDAQ9H2I8 198 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 PIGUQ9H490 435 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 REEP4Q9H6H4 257 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 C3orf14Q9HBI5 128 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 FAM212BQ9NTI7 297 aaPredicted RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 CBLN4Q9NTU7 201 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 GIN1Q9NXP7 522 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 MRTO4Q9UKD2 239 aaKnown RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 FOXA2Q9Y261 457 aaPredicted RBP3.62□□□□□ -1.83
VPS52-222ENST00000495981 KCNE3Q9Y6H6 103 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 ABCA13Q86UQ4 5058 aa3.62□□□□□ -1.83
VPS52-222ENST00000495981 UQCRHLA0A096LP55 91 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms