RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 TEKT2Q9UIF3 430 aa9.4□□□□□ -0.9
PRPF4B-209ENST00000494674 BOKQ9UMX3 212 aaPredicted RBP9.4□□□□□ -0.9
PRPF4B-209ENST00000494674 CAMK2AQ9UQM7 478 aa9.4□□□□□ -0.9
PRPF4B-209ENST00000494674 NPIPA2E9PIF3 369 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 NPIPA3F8WFD2 350 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 LYRM1O43325 122 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 LMX1BO60663 402 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 MAS1P04201 325 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ACSM4P0C7M7 580 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ITGA3P26006 1051 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 GDF1P27539 372 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 SELENOPP49908 381 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 MMP15P51511 669 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 PSMA6P60900 246 aaKnown RBP9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 DGCR2P98153 550 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 PLA2G7Q13093 441 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 TGIF1Q15583 401 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 OR1C1Q15619 314 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 SLC36A2Q495M3 483 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ATP1A1-AS1Q5TC04 95 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 RHOUQ7L0Q8 258 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 FCRLAQ7L513 359 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 TMPRSS12Q86WS5 348 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 UBQLNLQ8IYU4 475 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 C19orf18Q8NEA5 215 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 OR2V1Q8NHB1 315 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 YIPF5Q969M3 257 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 RFT1Q96AA3 541 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 UTP23Q9BRU9 249 aaKnown RBP9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 THAP7Q9BT49 309 aaPredicted RBP9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 MRI1Q9BV20 369 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 SF3B5Q9BWJ5 86 aaKnown RBP9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ABCG5Q9H222 651 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 MMP28Q9H239 520 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ASCL3Q9NQ33 180 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 RBFOX1Q9NWB1 397 aaKnown RBP9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 PLA2G3Q9NZ20 509 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ASH2LQ9UBL3 628 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 HHLA2Q9UM44 414 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 DHDHQ9UQ10 334 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 FLVCR1Q9Y5Y0 555 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 DNAJC13O75165 2243 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 RTTNQ86VV8 2226 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ANXA2P2A6NMY6 339 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ZNF878C9JN71 531 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 CTDSPLO15194 276 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 RER1O15258 196 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 EEF1E1O43324 174 aaKnown RBP9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 GSTZ1O43708 216 aaPredicted RBP9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 TLX3O43711 291 aaPredicted RBP9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 CXCL13O43927 109 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 TRAPPC6AO75865 159 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 HPNP05981 417 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ANXA2P07355 339 aaKnown RBP9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ITGA5P08648 1049 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 CELA3AP09093 270 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 UBCP0CG48 685 aaKnown RBP9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 PTH2RP49190 550 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ENDOGQ14249 297 aaKnown RBP9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 CARTPTQ16568 116 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 BCL2L15Q5TBC7 163 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 AGAP6Q5VW22 663 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 BAIAP2L2Q6UXY1 529 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ZNF704Q6ZNC4 412 aaPredicted RBP9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 LINC00696Q6ZRV3 163 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 GLCCI1Q86VQ1 547 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 LYPD6Q86Y78 171 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 SULF2Q8IWU5 870 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 C20orf196Q8IYI0 205 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 IZUMO1Q8IYV9 350 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ELMOD2Q8IZ81 293 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 UBE2J2Q8N2K1 259 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 IL22RA1Q8N6P7 574 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 MDS2Q8NDY4 140 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 DUSP18Q8NEJ0 188 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 OR10D3Q8NH80 312 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 AGAP4Q96P64 663 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ZNF416Q9BWM5 594 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 TAS2R4Q9NYW5 299 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 FOXJ3Q9UPW0 622 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 RHBDD3Q9Y3P4 386 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 ETV7Q9Y603 341 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 LOC400499M0QZD8 3231 aa9.39□□□□□ -0.91
PRPF4B-209ENST00000494674 A0A1B0GTI1 187 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 P2RY10O00398 339 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 NR2C1P13056 603 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 POU3F2P20265 443 aaPredicted RBP9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 MSR1P21757 451 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 CD82P27701 267 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 BTCP35070 178 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 DDOSTP39656 456 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 RFC3P40938 356 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 CASRP41180 1078 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 SCAND1P57086 179 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 CARD18P57730 90 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 LSM6P62312 80 aaKnown RBP9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 HIST1H3AP68431 136 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 HIST2H3PS2Q5TEC6 136 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 HIST2H3AQ71DI3 136 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 BIVMQ86UB2 503 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms