RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 GPANK1O95872 356 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 CYB5R3P00387 301 aaPredicted RBP10.62□□□□□ -0.71
SKA1-205ENST00000494518 DBHP09172 617 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 PPIAL4FP0DN26 164 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 IGHV4-38-2P0DP08 117 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 CTLA4P16410 223 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 ZNF26P17031 533 aaPredicted RBP10.62□□□□□ -0.71
SKA1-205ENST00000494518 TNFRSF1AP19438 455 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 SLC6A9P48067 706 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 MMP16P51512 607 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 PRKCDQ05655 676 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 SCRN3Q0VDG4 424 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 HLXQ14774 488 aaPredicted RBP10.62□□□□□ -0.71
SKA1-205ENST00000494518 TRAM2Q15035 370 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 TMEM155Q4W5P6 130 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 ESCO2Q56NI9 601 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 ZNF730Q6ZMV8 503 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 VASH1Q7L8A9 365 aaPredicted RBP10.62□□□□□ -0.71
SKA1-205ENST00000494518 ZER1Q7Z7L7 766 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 LRRC28Q86X40 367 aaPredicted RBP10.62□□□□□ -0.71
SKA1-205ENST00000494518 C1orf174Q8IYL3 243 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 OFCC1Q8IZS5 231 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 ATG16L2Q8NAA4 619 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 NPEPL1Q8NDH3 523 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 OR2T12Q8NG77 320 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 FNDC8Q8TC99 324 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 RASD2Q96D21 266 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 SAMD8Q96LT4 415 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 FNDC11Q9BVV2 318 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 MS4A7Q9GZW8 240 aaPredicted RBP10.62□□□□□ -0.71
SKA1-205ENST00000494518 OR5V1Q9UGF6 321 aa10.62□□□□□ -0.71
SKA1-205ENST00000494518 A0A087WUU8 490 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 ELOVL7A1L3X0 281 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 F5H0A9 414 aaPredicted RBP10.61□□□□□ -0.71
SKA1-205ENST00000494518 H0YL77 283 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 XKRYO14609 159 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 CDC42EP2O14613 210 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 FFAR1O14842 300 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 IFNW1P05000 195 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 KITLGP21583 273 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 IFNA8P32881 189 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 CD80P33681 288 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 MDH2P40926 338 aaKnown RBP10.61□□□□□ -0.71
SKA1-205ENST00000494518 SELENOWP63302 87 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 PRR31Q5SQ13 230 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 FAM201AQ5SY85 155 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 METTL21CQ5VZV1 264 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 OR2T2Q6IF00 324 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 SHISA2Q6UWI4 295 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 SYT9Q86SS6 491 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 POU5F2Q8N7G0 328 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 ZNF570Q96NI8 536 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 SIKE1Q9BRV8 207 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 SAR1AQ9NR31 198 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 TBCCD1Q9NVR7 557 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 ASH2LQ9UBL3 628 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 GRHPRQ9UBQ7 328 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 IL20RAQ9UHF4 553 aa10.61□□□□□ -0.71
SKA1-205ENST00000494518 COA3Q9Y2R0 106 aaPredicted RBP10.61□□□□□ -0.71
SKA1-205ENST00000494518 PRKDCP78527 4128 aaKnown RBP10.6□□□□□ -0.71
SKA1-205ENST00000494518 VWFP04275 2813 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 TRAV40A0A0B4J280 105 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 TEX13CA0A0J9YWL9 993 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 BBIP1A8MTZ0 92 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 A8MXK9 166 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 TMEM178BH3BS89 294 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 CD14P08571 375 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 COX5BP10606 129 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 RPS2P15880 293 aaKnown RBP10.6□□□□□ -0.71
SKA1-205ENST00000494518 SELEP16581 610 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 OMGP23515 440 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 CENPAP49450 140 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 GUCY1A3Q02108 690 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 DBPQ10586 325 aaPredicted RBP10.6□□□□□ -0.71
SKA1-205ENST00000494518 KRR1Q13601 381 aaKnown RBP10.6□□□□□ -0.71
SKA1-205ENST00000494518 SLC9A3R2Q15599 337 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 TUSC1Q2TAM9 212 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 CCDC92Q53HC0 331 aaPredicted RBP10.6□□□□□ -0.71
SKA1-205ENST00000494518 COQ5Q5HYK3 327 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 LEG1Q6P5S2 330 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 PARP8Q8N3A8 854 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 BHLHE23Q8NDY6 225 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 OR52E2Q8NGJ4 325 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 ACOT11Q8WXI4 607 aaPredicted RBP10.6□□□□□ -0.71
SKA1-205ENST00000494518 LZICQ8WZA0 190 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 RCN3Q96D15 328 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 HAVCR1Q96D42 359 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 FAM46AQ96IP4 442 aaKnown RBP10.6□□□□□ -0.71
SKA1-205ENST00000494518 GPA33Q99795 319 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 SYT4Q9H2B2 425 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 WDR76Q9H967 626 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 GCM1Q9NP62 436 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 TNFRSF19Q9NS68 423 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 GID8Q9NWU2 228 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 CMTM6Q9NX76 183 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 IL19Q9UHD0 177 aa10.6□□□□□ -0.71
SKA1-205ENST00000494518 PRSS37A4D1T9 235 aa10.59□□□□□ -0.71
SKA1-205ENST00000494518 OR6C6A6NF89 314 aa10.59□□□□□ -0.71
SKA1-205ENST00000494518 SOCS2O14508 198 aa10.59□□□□□ -0.71
SKA1-205ENST00000494518 RER1O15258 196 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms