RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 UBE2E3Q969T4 207 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 ORAI1Q96D31 301 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 AURKBQ96GD4 344 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-222ENST00000493919 OR8B4Q96RC9 309 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 G6PC3Q9BUM1 346 aa10.45□□□□□ -0.74
BRCA1-222ENST00000493919 SEC16AO15027 2179 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 A0A096LPI6 279 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 A0A1B0GTL3 188 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 SGK494L7N484 410 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 ACOT7O00154 380 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 ERI3O43414 337 aaKnown RBP10.44□□□□□ -0.74
BRCA1-222ENST00000493919 FOXS1O43638 330 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 RDH16O75452 317 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 PDLIM4P50479 330 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 STXBP1P61764 594 aaKnown RBP10.44□□□□□ -0.74
BRCA1-222ENST00000493919 DLK1P80370 383 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 DCST1Q5T197 706 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 AKR1C8PQ5T2L2 129 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 LIPMQ5VYY2 423 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 FAM219BQ5XKK7 198 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 PGBD2Q6P3X8 592 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 SHISA6Q6ZSJ9 500 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 SPATA19Q7Z5L4 167 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 UBE3DQ7Z6J8 389 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 YRDCQ86U90 279 aaKnown RBP10.44□□□□□ -0.74
BRCA1-222ENST00000493919 AQP12AQ8IXF9 295 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 MTURNQ8N3F0 131 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 ARHGEF39Q8N4T4 335 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 PXT1Q8NFP0 134 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 OR11H4Q8NGC9 324 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 OR5M9Q8NGP3 310 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 NT5CQ8TCD5 201 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 PPP1R14AQ96A00 147 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 ANAPC16Q96DE5 110 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 MVB12AQ96EY5 273 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 ZBED6CLQ96FA7 236 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-222ENST00000493919 MARK4Q96L34 752 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 OR2V2Q96R30 315 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 LPAR4Q99677 370 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 BARHL1Q9BZE3 327 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 TBL1XR1Q9BZK7 514 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 TUBA4BQ9H853 241 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 MMP25Q9NPA2 562 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 OXSMQ9NWU1 459 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 VNN3Q9NY84 501 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 FBXL4Q9UKA2 621 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 MRTO4Q9UKD2 239 aaKnown RBP10.44□□□□□ -0.74
BRCA1-222ENST00000493919 FARSAQ9Y285 508 aaKnown RBP10.44□□□□□ -0.74
BRCA1-222ENST00000493919 PTRH2Q9Y3E5 179 aaKnown RBP10.44□□□□□ -0.74
BRCA1-222ENST00000493919 SCN3AQ9NY46 2000 aa10.44□□□□□ -0.74
BRCA1-222ENST00000493919 C7orf66A4D0T2 115 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 TRAPPC13A5PLN9 417 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 TMEM200CA6NKL6 621 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 GJE1A6NN92 205 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 CLCA1A8K7I4 914 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 C4orf51C9J302 202 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 RPL36A-HNRNPH2H7BZ11 118 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 GPR31O00270 319 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 OR2T1O43869 369 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 AIREO43918 545 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 RBMXL2O75526 392 aaKnown RBP10.43□□□□□ -0.74
BRCA1-222ENST00000493919 CLEC3AO75596 197 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 SC5DO75845 299 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 AQP8O94778 261 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 OR4F21O95013 312 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 HPRP00739 348 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 ITGA5P08648 1049 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 ABOP16442 354 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 CD80P33681 288 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 SLC37A1P57057 533 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 FAM53BQ14153 422 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 MESTQ5EB52 335 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 ATP1A1-AS1Q5TC04 95 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 SAXO2Q658L1 398 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 DEF8Q6ZN54 512 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 AHSA2Q719I0 299 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 OR10A6Q8NH74 314 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 UCN3Q969E3 161 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 CTHRC1Q96CG8 243 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 MS4A4EQ96PG1 132 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 GSTO2Q9H4Y5 243 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 RHCGQ9UBD6 479 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 ANGPT4Q9Y264 503 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 BOD1L1Q8NFC6 3051 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 ZNF891A8MT65 544 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-222ENST00000493919 SLC33A1O00400 549 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-222ENST00000493919 SAP18O00422 153 aaKnown RBP10.43□□□□□ -0.74
BRCA1-222ENST00000493919 ANKRD28O15084 1053 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 ADAM20O43506 726 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 TBX19O60806 448 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 ATP6AP2O75787 350 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 TGFB1P01137 390 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 TNFSF8P32971 234 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 FOLR3P41439 243 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 MRPL19P49406 292 aaKnown RBP10.43□□□□□ -0.74
BRCA1-222ENST00000493919 ABRAXAS2Q15018 415 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 CARD17Q5XLA6 110 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 ZNF774Q6NX45 483 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 TRIM40Q6P9F5 258 aa10.43□□□□□ -0.74
BRCA1-222ENST00000493919 TMPRSS11AQ6ZMR5 421 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms