RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CTNNA3Q9UI47 895 aa1.86□□□□□ -2.11
ITGB1-216ENST00000493758 AKNAQ7Z591 1439 aa1.85□□□□□ -2.11
ITGB1-216ENST00000493758 CST1P01037 141 aa1.85□□□□□ -2.11
ITGB1-216ENST00000493758 CRYGBP07316 175 aa1.85□□□□□ -2.11
ITGB1-216ENST00000493758 ZNF806P0C7X5 589 aa1.85□□□□□ -2.11
ITGB1-216ENST00000493758 ME2P23368 584 aa1.85□□□□□ -2.11
ITGB1-216ENST00000493758 HCAR3P49019 387 aa1.85□□□□□ -2.11
ITGB1-216ENST00000493758 TMEM105Q8N8V8 129 aa1.85□□□□□ -2.11
ITGB1-216ENST00000493758 LHX5Q9H2C1 402 aa1.85□□□□□ -2.11
ITGB1-216ENST00000493758 WFDC1Q9HC57 220 aa1.85□□□□□ -2.11
ITGB1-216ENST00000493758 FGF20Q9NP95 211 aaPredicted RBP1.85□□□□□ -2.11
ITGB1-216ENST00000493758 STARD10Q9Y365 291 aa1.85□□□□□ -2.11
ITGB1-216ENST00000493758 PALLDQ8WX93 1383 aa1.85□□□□□ -2.11
ITGB1-216ENST00000493758 FAM47DPA6NHR8 397 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 LRRIQ3A6PVS8 624 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-216ENST00000493758 KLHL41O60662 606 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 CBR3O75828 277 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 SLC22A5O76082 557 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 IGHV3-11P01762 117 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 P0C880 135 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 LGALS3P17931 250 aaKnown RBP1.84□□□□□ -2.11
ITGB1-216ENST00000493758 PRPHP41219 470 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 TNNT2P45379 298 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-216ENST00000493758 CSNK1EP49674 416 aaKnown RBP1.84□□□□□ -2.11
ITGB1-216ENST00000493758 GFERP55789 205 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 CDK5Q00535 292 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 VPS26BQ4G0F5 336 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 MPV17L2Q567V2 206 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 TCEAL5Q5H9L2 206 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 TMEM150AQ86TG1 271 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 SLC35G3Q8N808 338 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 SHC3Q92529 594 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 TCEAL3Q969E4 200 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 HSD17B10Q99714 261 aaKnown RBP1.84□□□□□ -2.11
ITGB1-216ENST00000493758 RSG1Q9BU20 258 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 FGF23Q9GZV9 251 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-216ENST00000493758 FBXO6Q9NRD1 293 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-216ENST00000493758 HYPKQ9NX55 129 aa1.84□□□□□ -2.11
ITGB1-216ENST00000493758 IGHV3-72A0A0B4J1Y9 119 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 IGKV2-24A0A0C4DH68 120 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 ZNF98A6NK75 572 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 C16orf90A8MZG2 172 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 PPP1R2P9O14990 202 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 NUPL2O15504 423 aaKnown RBP1.83□□□□□ -2.12
ITGB1-216ENST00000493758 SEMA3DO95025 777 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 TSPAN13O95857 204 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 CT45A6P0DMU7 189 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 CT45A5P0DMU8 189 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 CT45A7P0DMV0 189 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 SLC2A3P11169 496 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 ERGP11308 486 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 P2RX1P51575 399 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 RND2P52198 227 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 PPP1CBP62140 327 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 IL15RAQ13261 267 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 CT45A1Q5HYN5 189 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 CASC1Q6TDU7 716 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 NIPA1Q7RTP0 329 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 TMEM256Q8N2U0 113 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 NPWQ8N729 165 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 C1orf64Q8NEQ6 169 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 CT45A3Q8NHU0 189 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 ZNF502Q8TBZ5 544 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 ATP5SQ99766 215 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 CHCHD7Q9BUK0 85 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 GON7Q9BXV9 100 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 SAMD10Q9BYL1 202 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 SLC38A10Q9HBR0 1119 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 ZNF586Q9NXT0 402 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 PSMC3IPQ9P2W1 217 aaPredicted RBP1.83□□□□□ -2.12
ITGB1-216ENST00000493758 ISY1Q9ULR0 285 aaKnown RBP1.83□□□□□ -2.12
ITGB1-216ENST00000493758 SIGLEC7Q9Y286 467 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 SEC16AO15027 2179 aa1.83□□□□□ -2.12
ITGB1-216ENST00000493758 LYRM9A8MSI8 78 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 AQP8O94778 261 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 CLIC3O95833 236 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 ZNF250P15622 560 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 ATF6P18850 670 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 VSX2P58304 361 aaPredicted RBP1.82□□□□□ -2.12
ITGB1-216ENST00000493758 TAS2R31P59538 309 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 ANKDD1AQ495B1 522 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 PRAMEF5Q5TYX0 476 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 PRAMEF6Q5VXH4 476 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 ADNP2Q6IQ32 1131 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 GUSBP11Q6P575 273 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 SASS6Q6UVJ0 657 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 C16orf47Q6ZP98 133 aaPredicted RBP1.82□□□□□ -2.12
ITGB1-216ENST00000493758 ZNF101Q8IZC7 436 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 COX18Q8N8Q8 333 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 C11orf72Q8NBR9 251 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 OR10AD1Q8NGE0 317 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 SLC7A13Q8TCU3 470 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 CCDC126Q96EE4 140 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 IP6K3Q96PC2 410 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 MICU1Q9BPX6 476 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 ZSCAN16Q9H4T2 348 aaPredicted RBP1.82□□□□□ -2.12
ITGB1-216ENST00000493758 DHCR7Q9UBM7 475 aaKnown RBP1.82□□□□□ -2.12
ITGB1-216ENST00000493758 LGALS13Q9UHV8 139 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 TRMT112Q9UI30 125 aaKnown RBP1.82□□□□□ -2.12
ITGB1-216ENST00000493758 CSDC2Q9Y534 153 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms