RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 SNX31Q8N9S9 440 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 OR8D1Q8WZ84 308 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 SH3GL3Q99963 347 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 PAXXQ9BUH6 204 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 NDEL1Q9GZM8 345 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 CHRNA10Q9GZZ6 450 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 ENPP5Q9UJA9 477 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 V9GYY5 206 aaPredicted RBP3.48□□□□□ -1.85
VPS13A-212ENST00000493341 DIP2BQ9P265 1576 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 HCFC1P51610 2035 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 TCF20Q9UGU0 1960 aaKnown RBP3.48□□□□□ -1.85
VPS13A-212ENST00000493341 GLI2P10070 1586 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 EEA1Q15075 1411 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 HACD1B0YJ81 288 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 E7EWF7 191 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 SERF1AO75920 110 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 IGHV3-23P01764 117 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 GABRG2P18507 467 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 PAFAH1B2P68402 229 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 COTL1Q14019 142 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 TFDP2Q14188 446 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 KYAT1Q16773 422 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 NDUFAF6Q330K2 333 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 ATAD3CQ5T2N8 411 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 FHL5Q5TD97 284 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 HORMAD1Q86X24 394 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 FBXO16Q8IX29 292 aaPredicted RBP3.48□□□□□ -1.85
VPS13A-212ENST00000493341 OR1N2Q8NGR9 330 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 OR6K6Q8NGW6 343 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 OR2L2Q8NH16 312 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 MRGPRFQ96AM1 343 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 SCGB3A2Q96PL1 93 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 CALN1Q9BXU9 219 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 GABARAPL3Q9BY60 117 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 DEFB127Q9H1M4 99 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 CLMPQ9H6B4 373 aa3.48□□□□□ -1.85
VPS13A-212ENST00000493341 CIB4A0PJX0 185 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 NCBP2LA6PVI3 153 aaKnown RBP3.47□□□□□ -1.85
VPS13A-212ENST00000493341 GABRPO00591 440 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 NDUFS6O75380 124 aaKnown RBP3.47□□□□□ -1.85
VPS13A-212ENST00000493341 TNFSF13O75888 250 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 TPM3P06753 285 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 RNF224P0DH78 156 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 PSMB1P20618 241 aaKnown RBP3.47□□□□□ -1.85
VPS13A-212ENST00000493341 SHC1P29353 583 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 SLC35B1P78383 322 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 UNC119Q13432 240 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 TNXAQ16473 311 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 PAGE3Q5JUK9 113 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 ZNF470Q6ECI4 717 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 MBOAT2Q6ZWT7 520 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 OAFQ86UD1 273 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 RALGPS2Q86X27 583 aaPredicted RBP3.47□□□□□ -1.85
VPS13A-212ENST00000493341 WDR31Q8NA23 367 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 OR6N2Q8NGY6 317 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 CDKL2Q92772 493 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 UCN3Q969E3 161 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 FAM3DQ96BQ1 224 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 ZNF317Q96PQ6 595 aaPredicted RBP3.47□□□□□ -1.85
VPS13A-212ENST00000493341 CYTH2Q99418 400 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 UQCC2Q9BRT2 126 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 CLEC2DQ9UHP7 191 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 ABCC2Q92887 1545 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 NOTCH4Q99466 2003 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 KIF21BO75037 1637 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 ABCC10Q5T3U5 1492 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 SAMD9Q5K651 1589 aa3.47□□□□□ -1.85
VPS13A-212ENST00000493341 PPRC1Q5VV67 1664 aaKnown RBP3.47□□□□□ -1.85
VPS13A-212ENST00000493341 COL22A1Q8NFW1 1626 aaPredicted RBP3.46□□□□□ -1.86
VPS13A-212ENST00000493341 RDH16O75452 317 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 AQP8O94778 261 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 C6orf47O95873 294 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 THY1P04216 161 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 RPN2P04844 631 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 RHOCP08134 193 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 CHTF8P0CG12 524 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 ICAM2P13598 275 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 HRH1P35367 487 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 MAS1LP35410 378 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 SEMG2Q02383 582 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 ZNF266Q14584 549 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 NSDHLQ15738 373 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 PSG3Q16557 428 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 HIGD2BQ4VC39 106 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 RWDD4Q6NW29 188 aaKnown RBP3.46□□□□□ -1.86
VPS13A-212ENST00000493341 PAMR1Q6UXH9 720 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 LINC00173Q6ZV60 143 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 ERO1BQ86YB8 467 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 ARRDC1Q8N5I2 433 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 OR52E2Q8NGJ4 325 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 DCUN1D4Q92564 292 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 CPB2Q96IY4 423 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 DEFB126Q9BYW3 111 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 OR52A5Q9H2C5 316 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 SLC39A1Q9NY26 324 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 UBAP1Q9NZ09 502 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 Q9UF83 564 aa3.46□□□□□ -1.86
VPS13A-212ENST00000493341 MTRF1LQ9UGC7 380 aaKnown RBP3.46□□□□□ -1.86
VPS13A-212ENST00000493341 MRPS18BQ9Y676 258 aaKnown RBP3.46□□□□□ -1.86
VPS13A-212ENST00000493341 JCADQ9P266 1359 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms