RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 PSMD9O00233 223 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 SLC1A7O00341 560 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 LYNP07948 512 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 CCL2P13500 99 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 CBR1P16152 277 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 APEX1P27695 318 aaKnown RBP14.95□□□□□ -0.02
LIME1-208ENST00000493265 HTR5AP47898 357 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 TAF13Q15543 124 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 KLHL22Q53GT1 634 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 CCDC92Q53HC0 331 aaPredicted RBP14.95□□□□□ -0.02
LIME1-208ENST00000493265 AHSA2Q719I0 299 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 SYT9Q86SS6 491 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 MYPOPQ86VE0 399 aaPredicted RBP14.95□□□□□ -0.02
LIME1-208ENST00000493265 ALDH16A1Q8IZ83 802 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 ZNF295-AS1Q8N0V1 137 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 CPEB3Q8NE35 698 aaKnown RBP14.95□□□□□ -0.02
LIME1-208ENST00000493265 OR52I1Q8NGK6 324 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 OTOSQ8NHW6 89 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 GGHQ92820 318 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 SLAMF6Q96DU3 332 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 C1orf198Q9H425 327 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 SCN3BQ9NY72 215 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 MYRFQ9Y2G1 1151 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 LRRC42Q9Y546 428 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 DAPL1A0PJW8 107 aa14.94□□□□□ -0.02
LIME1-208ENST00000493265 MAGEB4O15481 346 aaPredicted RBP14.94□□□□□ -0.02
LIME1-208ENST00000493265 FADS2O95864 444 aaKnown RBP14.94□□□□□ -0.02
LIME1-208ENST00000493265 CCNOP22674 350 aa14.94□□□□□ -0.02
LIME1-208ENST00000493265 CXCR4P61073 352 aa14.94□□□□□ -0.02
LIME1-208ENST00000493265 RAB40BQ12829 278 aa14.94□□□□□ -0.02
LIME1-208ENST00000493265 RAB35Q15286 201 aa14.94□□□□□ -0.02
LIME1-208ENST00000493265 PCK2Q16822 640 aa14.94□□□□□ -0.02
LIME1-208ENST00000493265 ELFN2Q5R3F8 820 aa14.94□□□□□ -0.02
LIME1-208ENST00000493265 VASH1Q7L8A9 365 aaPredicted RBP14.94□□□□□ -0.02
LIME1-208ENST00000493265 DMRTC2Q8IXT2 367 aaPredicted RBP14.94□□□□□ -0.02
LIME1-208ENST00000493265 ZNF454Q8N9F8 522 aa14.94□□□□□ -0.02
LIME1-208ENST00000493265 ZNF540Q8NDQ6 660 aa14.94□□□□□ -0.02
LIME1-208ENST00000493265 SLC7A6Q92536 515 aa14.94□□□□□ -0.02
LIME1-208ENST00000493265 DACH2Q96NX9 599 aa14.94□□□□□ -0.02
LIME1-208ENST00000493265 EXOGQ9Y2C4 368 aaKnown RBP14.94□□□□□ -0.02
LIME1-208ENST00000493265 MED13LQ71F56 2210 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 IGHV1-18A0A0C4DH31 117 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 A0A1W2PQL4 384 aaPredicted RBP14.93□□□□□ -0.02
LIME1-208ENST00000493265 EFCAB10A6NFE3 127 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 OR2T7P0C7T2 308 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 CECR9P0C854 216 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 APLNRP35414 380 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 PEX19P40855 299 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 KRTAP10-9P60411 292 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 HIST1H3AP68431 136 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 GALK2Q01415 458 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 HIST2H3PS2Q5TEC6 136 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 SEZ6L2Q6UXD5 910 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 LRRN1Q6UXK5 716 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 HIST2H3AQ71DI3 136 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 SSX6Q7RTT6 188 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 ZNF584Q8IVC4 421 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 STX19Q8N4C7 294 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 OR10S1Q8NGN2 331 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 OR2T27Q8NH04 317 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 OR1F12Q8NHA8 337 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 ST7LQ8TDW4 575 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 SGCDQ92629 289 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 COPS4Q9BT78 406 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 WACQ9BTA9 647 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 NGBQ9NPG2 151 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 PLCXD1Q9NUJ7 323 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 PSORS1C1Q9UIG5 152 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 IKZF2Q9UKS7 526 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 TMEM14AQ9Y6G1 99 aa14.93□□□□□ -0.02
LIME1-208ENST00000493265 SETD2Q9BYW2 2564 aaPredicted RBP14.92□□□□□ -0.02
LIME1-208ENST00000493265 C5orf49A4QMS7 147 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 SYNGR3O43761 229 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 SERPINA5P05154 406 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 DBHP09172 617 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 H2BFMP0C1H6 154 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 EPXP11678 715 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 ZNF14P17017 642 aaPredicted RBP14.92□□□□□ -0.02
LIME1-208ENST00000493265 IGFBP2P18065 325 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 ALOX5APP20292 161 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 EEF1B2P24534 225 aaKnown RBP14.92□□□□□ -0.02
LIME1-208ENST00000493265 STOMP27105 288 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 SLC15A1P46059 708 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 GDI2P50395 445 aaKnown RBP14.92□□□□□ -0.02
LIME1-208ENST00000493265 CSNK2BP67870 215 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 ST3GAL4Q11206 333 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 ZNF322Q6U7Q0 402 aaPredicted RBP14.92□□□□□ -0.02
LIME1-208ENST00000493265 KRT77Q7Z794 578 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 LHFPL3Q86UP9 236 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 ACBD7Q8N6N7 88 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 SLC30A7Q8NEW0 376 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 PIK3IP1Q96FE7 263 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 PLPPR2Q96GM1 343 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 TMEM80Q96HE8 168 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 RADILQ96JH8 1075 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 ZNF75AQ96N20 296 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 ATF6BQ99941 703 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 HDHD2Q9H0R4 259 aa14.92□□□□□ -0.02
LIME1-208ENST00000493265 PNRC2Q9NPJ4 139 aaKnown RBP14.92□□□□□ -0.02
LIME1-208ENST00000493265 SLCO1C1Q9NYB5 712 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms