RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 FBXO17Q96EF6 278 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 MNTQ99583 582 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 PLEKHF2Q9H8W4 249 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 FGF20Q9NP95 211 aaPredicted RBP11.7□□□□□ -0.54
MSH6-208ENST00000493177 NGBQ9NPG2 151 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 SLC17A5Q9NRA2 495 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 ERVK-18Q9QC07 812 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 CYB5R1Q9UHQ9 305 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 GDF2Q9UK05 429 aaPredicted RBP11.7□□□□□ -0.54
MSH6-208ENST00000493177 COPS3Q9UNS2 423 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 LHFPL6Q9Y693 200 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 TMEM14AQ9Y6G1 99 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 FBN2P35556 2912 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 OR5H1A6NKK0 313 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 DEFB108AA8MXU0 73 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 PHYHO14832 338 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 ATE1O95260 518 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 TNFAIP8O95379 198 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 CDK1P06493 297 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 LYNP07948 512 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 HOXB1P14653 301 aaPredicted RBP11.69□□□□□ -0.54
MSH6-208ENST00000493177 ZNF32P17041 273 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 DCKP27707 260 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 NR1H2P55055 460 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 GABARAPL2P60520 117 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 SCRN3Q0VDG4 424 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 TESK1Q15569 626 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 DEFB113Q30KQ7 82 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 DPPA2Q7Z7J5 298 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 CCDC36Q8IYA8 594 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 ACBD7Q8N6N7 88 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 GJC3Q8NFK1 279 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 OTOSQ8NHW6 89 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 FGFBP3Q8TAT2 258 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 SGCDQ92629 289 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 PLPPR2Q96GM1 343 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 NR1H4Q96RI1 486 aaPredicted RBP11.69□□□□□ -0.54
MSH6-208ENST00000493177 CCL19Q99731 98 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 WACQ9BTA9 647 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 OR10A4Q9H209 315 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 C1orf198Q9H425 327 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 CENPMQ9NSP4 180 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 FKBP14Q9NWM8 211 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 PAK1IP1Q9NWT1 392 aaPredicted RBP11.69□□□□□ -0.54
MSH6-208ENST00000493177 DIMT1Q9UNQ2 313 aaKnown RBP11.69□□□□□ -0.54
MSH6-208ENST00000493177 KLHDC2Q9Y2U9 406 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 AMDHD2Q9Y303 409 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 EXOSC1Q9Y3B2 195 aaKnown RBP11.69□□□□□ -0.54
MSH6-208ENST00000493177 TIMM10BQ9Y5J6 103 aa11.69□□□□□ -0.54
MSH6-208ENST00000493177 ADGRG4Q8IZF6 3080 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 ARPC4-TTLL3A0A0A6YYG9 625 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.68□□□□□ -0.54
MSH6-208ENST00000493177 A0A1W2PQL4 384 aaPredicted RBP11.68□□□□□ -0.54
MSH6-208ENST00000493177 J3QRE1 110 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 RER1O15258 196 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 DOK2O60496 412 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 WNT11O96014 354 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 ARR3P36575 388 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 CDH15P55291 814 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 RAB1AP62820 205 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 SLC35A2P78381 396 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 TAF13Q15543 124 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 PCK2Q16822 640 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 GSG1Q2KHT4 349 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 KCTD21Q4G0X4 260 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 TIMM23BQ5SRD1 257 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 CFAP77Q6ZQR2 320 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 SYT9Q86SS6 491 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 LHFPL3Q86UP9 236 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 MDP1Q86V88 176 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 RFLNBQ8N5W9 214 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 WDR31Q8NA23 367 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 AKR7LQ8NHP1 331 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 SNX33Q8WV41 574 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 ASB17Q8WXJ9 295 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 MUCL1Q96DR8 90 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 SLAMF6Q96DU3 332 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 MRPL48Q96GC5 212 aaKnown RBP11.68□□□□□ -0.54
MSH6-208ENST00000493177 MYCBPQ99417 103 aaPredicted RBP11.68□□□□□ -0.54
MSH6-208ENST00000493177 USB1Q9BQ65 265 aaKnown RBP11.68□□□□□ -0.54
MSH6-208ENST00000493177 ABHD6Q9BV23 337 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 ALG8Q9BVK2 526 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 OR2H1Q9GZK4 316 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 DUSP21Q9H596 190 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 OBP2BQ9NPH6 170 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 INPP5EQ9NRR6 644 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 PLEK2Q9NYT0 353 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 ZNF224Q9NZL3 707 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 IKZF2Q9UKS7 526 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 SNX5Q9Y5X3 404 aa11.68□□□□□ -0.54
MSH6-208ENST00000493177 ANKHD1Q8IWZ3 2542 aaKnown RBP11.68□□□□□ -0.54
MSH6-208ENST00000493177 PDZD2O15018 2839 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 ZNF503-AS2A6NEH8 195 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 PSMD9O00233 223 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 MYL12BO14950 172 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 SIAH2O43255 324 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 SGCEO43556 437 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 SMPD2O60906 423 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 IGHA1P01876 353 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 MT-ND2P03891 347 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms