RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 LALBAP00709 142 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 IGLV1-44P01699 117 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 AMBPP02760 352 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 FGF1P05230 155 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 C2P06681 752 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 MELTFP08582 738 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 RBMY1CP0DJD4 496 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 IGHV1-2P23083 117 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 RORAP35398 523 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 CRISP1P54107 249 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 BIDP55957 195 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 CLDN6P56747 220 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 GPX6P59796 221 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 ERVK-25P63136 954 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 CHRNB3Q05901 458 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 TWF1Q12792 350 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 PDGFRLQ15198 375 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 ALX1Q15699 326 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 LTB4RQ15722 352 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 ZNF506Q5JVG8 444 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 EOGTQ5NDL2 527 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 METTL11BQ5VVY1 283 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 ASCL4Q6XD76 172 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 FRA10AC1Q70Z53 315 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 FAM122BQ7Z309 247 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 APRG1Q8IVJ8 170 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 ZNF100Q8IYN0 542 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 SYCE1Q8N0S2 351 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 JAGN1Q8N5M9 183 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 DEFB119Q8N690 84 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 C4orf32Q8N8J7 132 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 TTC29Q8NA56 475 aaPredicted RBP4.09□□□□□ -1.75
SND1-216ENST00000492840 GATSQ8NAP1 163 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 OR4Q3Q8NH05 313 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 NPRL2Q8WTW4 380 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 ZNF597Q96LX8 424 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 OR8B4Q96RC9 309 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 KLHDC3Q9BQ90 382 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 TMEM246Q9BRR3 403 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 CHCHD5Q9BSY4 110 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 UCK2Q9BZX2 261 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 IMPAD1Q9NX62 359 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 SLC17A4Q9Y2C5 497 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 PLLPQ9Y342 182 aa4.09□□□□□ -1.75
SND1-216ENST00000492840 ARID1BQ8NFD5 2236 aaPredicted RBP4.09□□□□□ -1.76
SND1-216ENST00000492840 LRBAP50851 2863 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 PRSS37A4D1T9 235 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 LOC110117498-PIK3R3F6TDL0 507 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 CCL21O00585 134 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 ERLIN2O94905 339 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 CCNB2O95067 398 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 FGFR1OPO95684 399 aaKnown RBP4.08□□□□□ -1.76
SND1-216ENST00000492840 IFNW1P05000 195 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 LAMP1P11279 417 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 UGT1A4P22310 534 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 LCN1P31025 176 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 RGRP47804 291 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 PSMD4P55036 377 aaKnown RBP4.08□□□□□ -1.76
SND1-216ENST00000492840 YWHAEP62258 255 aaKnown RBP4.08□□□□□ -1.76
SND1-216ENST00000492840 TLE4Q04727 773 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 SLC10A7Q0GE19 358 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 XRCC4Q13426 336 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 RCAN2Q14206 197 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 SLC22A6Q4U2R8 563 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 SAMD4BQ5PRF9 694 aaKnown RBP4.08□□□□□ -1.76
SND1-216ENST00000492840 GPR157Q5UAW9 335 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 GPR107Q5VW38 600 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 ULK3Q6PHR2 472 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 TIPARPQ7Z3E1 657 aaKnown RBP4.08□□□□□ -1.76
SND1-216ENST00000492840 FBXO36Q8NEA4 188 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 LRRC20Q8TCA0 184 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 TFB1MQ8WVM0 346 aaKnown RBP4.08□□□□□ -1.76
SND1-216ENST00000492840 PIH1D2Q8WWB5 315 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 FRAT1Q92837 279 aaPredicted RBP4.08□□□□□ -1.76
SND1-216ENST00000492840 MYDGFQ969H8 173 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 CMTM7Q96FZ5 175 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 PAGE5Q96GU1 130 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 SLC45A3Q96JT2 553 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 HSFY1Q96LI6 401 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 NOL4LQ96MY1 436 aaPredicted RBP4.08□□□□□ -1.76
SND1-216ENST00000492840 LITAFQ99732 161 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 TM6SF2Q9BZW4 377 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 ACTR3CQ9C0K3 210 aaPredicted RBP4.08□□□□□ -1.76
SND1-216ENST00000492840 NMUR2Q9GZQ4 415 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 TMPRSS5Q9H3S3 457 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 TREM1Q9NP99 234 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 NRBP2Q9NSY0 501 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 ASIC3Q9UHC3 531 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 HES2Q9Y543 173 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 KPTNQ9Y664 436 aa4.08□□□□□ -1.76
SND1-216ENST00000492840 SVILO95425 2214 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 MED13LQ71F56 2210 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 MED13Q9UHV7 2174 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 UTP20O75691 2785 aaKnown RBP4.07□□□□□ -1.76
SND1-216ENST00000492840 IGLV7-46A0A075B6I9 117 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 IGLV3-22A0A075B6J6 115 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 IGHV1OR15-9A0A0B4J2B8 117 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 IGKV6-21A0A0C4DH24 114 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 A0A1W2PRD5 423 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms