RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 FMODQ06828 376 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 ACSM5Q6NUN0 579 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 DNM1P34Q6PK57 102 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 CYB561A3Q8NBI2 242 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 CYGBQ8WWM9 190 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 BPESC1Q9GZL8 116 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 SYT4Q9H2B2 425 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 CMC2Q9NRP2 79 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 IMPAD1Q9NX62 359 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 FZR1Q9UM11 496 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 CMAHPQ9Y471 501 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 GMPPBQ9Y5P6 360 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 FBN3Q75N90 2809 aa10.9□□□□□ -0.66
SEC61A1-206ENST00000491668 A0A1W2PPL8 197 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 ZAR1LA6NP61 321 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 PRR23D1E9PI22 279 aaPredicted RBP10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 LYNX1G3V0Z9 82 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 SLC16A7O60669 478 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 RAB36O95755 333 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 PRR23D2P0DMB1 279 aaPredicted RBP10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 LYNX1P0DP58 116 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 DAOP14920 347 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 ZNF16P17020 682 aaPredicted RBP10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 GIFP27352 417 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 EPHA2P29317 976 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 CRABP1P29762 137 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 CDAP32320 146 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 POLR2IP36954 125 aaKnown RBP10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 EVX1P49640 407 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 CRMP1Q14194 572 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 GGTLC2Q14390 218 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 CARTPTQ16568 116 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 NRN1LQ496H8 165 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 C10orf128Q5T292 105 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 SLX4IPQ5VYV7 408 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 PTCHD4Q6ZW05 846 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 SLC37A3Q8NCC5 494 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 CPEB3Q8NE35 698 aaKnown RBP10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 NABP1Q96AH0 204 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 MSI2Q96DH6 328 aaKnown RBP10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 SNX18Q96RF0 628 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 SYT3Q9BQG1 590 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 PIMREGQ9BSJ6 248 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 RAB1BQ9H0U4 201 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 TPK1Q9H3S4 243 aa10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 SRA1Q9HD15 236 aaKnown RBP10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 RPRD1BQ9NQG5 326 aaKnown RBP10.89□□□□□ -0.67
SEC61A1-206ENST00000491668 LOC100130705A0A1B0GUX0 176 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 LRP5LA4QPB2 252 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 SURF4O15260 269 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 KHDRBS3O75525 346 aaKnown RBP10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 IL2RGP31785 369 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 VHLP40337 213 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 ALDH3B1P43353 468 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 RIN1Q13671 783 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 MAD2L1BPQ15013 274 aaPredicted RBP10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 SNCBQ16143 134 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 CYB5R2Q6BCY4 276 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 SLC25A47Q6Q0C1 308 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 ZNF786Q8N393 782 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 DHRSXQ8N5I4 330 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 SLC30A7Q8NEW0 376 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 PROKR2Q8NFJ6 384 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 OR2T4Q8NH00 348 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 FAM81AQ8TBF8 368 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 NRG4Q8WWG1 115 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 NEU4Q8WWR8 484 aaPredicted RBP10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 MBOAT4Q96T53 435 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 NUAK2Q9H093 628 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 FN3KQ9H479 309 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 MYOZ1Q9NP98 299 aaPredicted RBP10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 FAM118AQ9NWS6 357 aa10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 VSX1Q9NZR4 365 aaPredicted RBP10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 H2AFY2Q9P0M6 372 aaPredicted RBP10.88□□□□□ -0.67
SEC61A1-206ENST00000491668 OR6C68A6NDL8 312 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 FAM183AA6NL82 134 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 VSTM5A8MXK1 200 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 SYNGR3O43761 229 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 LILRA1O75019 489 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 FARS2O95363 451 aaKnown RBP10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 HLA-DQA2P01906 255 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 FAM157BP0CG42 384 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 GGT2P36268 569 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 ERVS71-1P61550 626 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 RPS7P62081 194 aaKnown RBP10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 MRPS34P82930 218 aaKnown RBP10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 SGCAQ16586 387 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 KLHL12Q53G59 568 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 TMEM255AQ5JRV8 349 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 ELFN2Q5R3F8 820 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 TTC23Q5W5X9 447 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 C12orf73Q69YU5 71 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 PLBD1Q6P4A8 553 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 CXXC5Q7LFL8 322 aaKnown RBP10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 SLC16A14Q7RTX9 510 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 LRRC18Q8N456 261 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 TCEANCQ8N8B7 351 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 NPEPL1Q8NDH3 523 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 OR9Q1Q8NGQ5 310 aa10.87□□□□□ -0.67
SEC61A1-206ENST00000491668 UBASH3BQ8TF42 649 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms