RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 PAMR1Q6UXH9 720 aa11.88□□□□□ -0.51
NUP188-208ENST00000491502 TUBA1AQ71U36 451 aa11.88□□□□□ -0.51
NUP188-208ENST00000491502 ZNF679Q8IYX0 411 aa11.88□□□□□ -0.51
NUP188-208ENST00000491502 C11orf40Q8WZ69 217 aa11.88□□□□□ -0.51
NUP188-208ENST00000491502 APH1AQ96BI3 265 aa11.88□□□□□ -0.51
NUP188-208ENST00000491502 SLCO5A1Q9H2Y9 848 aa11.88□□□□□ -0.51
NUP188-208ENST00000491502 NELFAQ9H3P2 528 aa11.88□□□□□ -0.51
NUP188-208ENST00000491502 C1orf198Q9H425 327 aa11.88□□□□□ -0.51
NUP188-208ENST00000491502 NIPAL2Q9H841 368 aa11.88□□□□□ -0.51
NUP188-208ENST00000491502 NPDC1Q9NQX5 325 aaPredicted RBP11.88□□□□□ -0.51
NUP188-208ENST00000491502 MRPL22Q9NWU5 206 aaKnown RBP11.88□□□□□ -0.51
NUP188-208ENST00000491502 CLCF1Q9UBD9 225 aa11.88□□□□□ -0.51
NUP188-208ENST00000491502 UPB1Q9UBR1 384 aa11.88□□□□□ -0.51
NUP188-208ENST00000491502 EMC9Q9Y3B6 208 aa11.88□□□□□ -0.51
NUP188-208ENST00000491502 ZNF587BE7ETH6 402 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 CRHP06850 196 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 PRF1P14222 555 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 ASCL1P50553 236 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 RIDAP52758 137 aaKnown RBP11.87□□□□□ -0.51
NUP188-208ENST00000491502 HCCSP53701 268 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 PCBD1P61457 104 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 MRPS34P82930 218 aaKnown RBP11.87□□□□□ -0.51
NUP188-208ENST00000491502 SGCAQ16586 387 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 FBXL19-AS1Q494R0 122 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 TP53I3Q53FA7 332 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 FOXL2NBQ6ZUU3 175 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 USP43Q70EL4 1123 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.87□□□□□ -0.51
NUP188-208ENST00000491502 TUSC5Q8IXB3 177 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 ZNF295-AS1Q8N0V1 137 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 C9orf106Q8NAJ2 232 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 NAXEQ8NCW5 288 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 OR52N5Q8NH56 324 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 THRSPQ92748 146 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 OR8B4Q96RC9 309 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 SFXN3Q9BWM7 321 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 ISG20L2Q9H9L3 353 aaKnown RBP11.87□□□□□ -0.51
NUP188-208ENST00000491502 SIAEQ9HAT2 523 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 EXOSC4Q9NPD3 245 aaKnown RBP11.87□□□□□ -0.51
NUP188-208ENST00000491502 POLE4Q9NR33 117 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 KCNN3Q9UGI6 736 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 COPS3Q9UNS2 423 aa11.87□□□□□ -0.51
NUP188-208ENST00000491502 DOCK7Q96N67 2140 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 LOC100506127A0A0U1RQW1 187 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 OGG1O15527 345 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 PLPP2O43688 288 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 APOC1P02654 83 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 GADD45AP24522 165 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 EDNRAP25101 427 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 DCTDP32321 178 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 SERPINB10P48595 397 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 TAF13Q15543 124 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 SSX1Q16384 188 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 CTF1Q16619 201 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 ZNF829Q3KNS6 432 aaPredicted RBP11.86□□□□□ -0.51
NUP188-208ENST00000491502 KLHL24Q6TFL4 600 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 LYPD4Q6UWN0 246 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 DCXRQ7Z4W1 244 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 RELL2Q8NC24 303 aaPredicted RBP11.86□□□□□ -0.51
NUP188-208ENST00000491502 GJC3Q8NFK1 279 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 RNASE6Q93091 150 aaKnown RBP11.86□□□□□ -0.51
NUP188-208ENST00000491502 ZNF775Q96BV0 537 aaPredicted RBP11.86□□□□□ -0.51
NUP188-208ENST00000491502 ABHD6Q9BV23 337 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 PIGMQ9H3S5 423 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 CRLF2Q9HC73 371 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 CYB5R1Q9UHQ9 305 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 TEX15Q9BXT5 2789 aa11.86□□□□□ -0.51
NUP188-208ENST00000491502 TRBV2A0A0J9YWF9 115 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 TRDV1A0A1B0GX56 115 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 RPL36A-HNRNPH2H7BZ11 118 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 SS18L1O75177 396 aaPredicted RBP11.85□□□□□ -0.51
NUP188-208ENST00000491502 GPANK1O95872 356 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 H2BFMP0C1H6 154 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 UGT2B10P36537 528 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 AQP6Q13520 282 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 MEP1BQ16820 701 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 ZNF684Q5T5D7 378 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 FAM27BQ5VT28 67 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 ARL9Q6T311 187 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 SLC16A12Q6ZSM3 486 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 SSX6Q7RTT6 188 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 DPPA2Q7Z7J5 298 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 SYT9Q86SS6 491 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 UBE2J2Q8N2K1 259 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 SMAP2Q8WU79 429 aaPredicted RBP11.85□□□□□ -0.51
NUP188-208ENST00000491502 PHYHIPQ92561 330 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 SMIM19Q96E16 107 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 PELI1Q96FA3 418 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 FOXN4Q96NZ1 517 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 CHCHD6Q9BRQ6 235 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 NAA50Q9GZZ1 169 aaKnown RBP11.85□□□□□ -0.51
NUP188-208ENST00000491502 COMMD4Q9H0A8 199 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 ELOVL3Q9HB03 270 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 GPR35Q9HC97 309 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 JKAMPQ9P055 326 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 MRM2Q9UI43 246 aaKnown RBP11.85□□□□□ -0.51
NUP188-208ENST00000491502 ING1Q9UK53 422 aaPredicted RBP11.85□□□□□ -0.51
NUP188-208ENST00000491502 ADGRG4Q8IZF6 3080 aa11.85□□□□□ -0.51
NUP188-208ENST00000491502 IGKV1D-43A0A0B4J1Z2 117 aa11.84□□□□□ -0.51
NUP188-208ENST00000491502 TMEM212A6NML5 194 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms