RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 IGKV1D-42A0A075B6H8 117 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 ELOA3DA6NLF2 546 aaPredicted RBP20.28■□□□□ 0.84
USF3-203ENST00000491165 BLOC1S5-TXNDC5H3BN57 136 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 KHDRBS3O75525 346 aaKnown RBP20.28■□□□□ 0.84
USF3-203ENST00000491165 PGCP20142 388 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 CDKN2AP42771 156 aaKnown RBP20.28■□□□□ 0.84
USF3-203ENST00000491165 MAGEB1P43366 347 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 SLC6A8P48029 635 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 MEOX1P50221 254 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 SLC25A1P53007 311 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 PLPPR5Q32ZL2 321 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 ELOA3BQ3SY89 546 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 SLC16A9Q7RTY1 509 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 KCTD20Q7Z5Y7 419 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 SERPINA12Q8IW75 414 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 ELOA3Q8NG57 546 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 RNF166Q96A37 237 aaPredicted RBP20.28■□□□□ 0.84
USF3-203ENST00000491165 RADILQ96JH8 1075 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 Q96M85 177 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 C5orf34Q96MH7 638 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 SLITRK2Q9H156 845 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 ZNF71Q9NQZ8 489 aaPredicted RBP20.28■□□□□ 0.84
USF3-203ENST00000491165 TAS2R10Q9NYW0 307 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 EIF3KQ9UBQ5 218 aaKnown RBP20.28■□□□□ 0.84
USF3-203ENST00000491165 KLF13Q9Y2Y9 288 aaPredicted RBP20.28■□□□□ 0.84
USF3-203ENST00000491165 ATRXP46100 2492 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 ZNF407Q9C0G0 2248 aa20.28■□□□□ 0.84
USF3-203ENST00000491165 CALCBP10092 127 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 MSX1P28360 303 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 CLDN12P56749 244 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 TMEM255AQ5JRV8 349 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 METTL11BQ5VVY1 283 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 WBP2NLQ6ICG8 309 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 POMZP3Q6PJE2 187 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 OR2T35Q8NGX2 323 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 SYNPRQ8TBG9 265 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 RAB40AQ8WXH6 277 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 RELTQ969Z4 430 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 TTTY12Q9BZ98 90 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 ADAM19Q9H013 955 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 FOXJ3Q9UPW0 622 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 AUP1Q9Y679 476 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 A0A1B0GUH1 482 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 ICMTO60725 284 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 IFNA7P01567 189 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 TACR3P29371 465 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 AQP2P41181 271 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 VEGFCP49767 419 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 SUMO3P55854 103 aaPredicted RBP20.27■□□□□ 0.84
USF3-203ENST00000491165 MRPS10P82664 201 aaKnown RBP20.27■□□□□ 0.84
USF3-203ENST00000491165 RNFT1Q5M7Z0 435 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 TMEM69Q5SWH9 247 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 ZADH2Q8N4Q0 377 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 ZNF511Q8NB15 262 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 SUN5Q8TC36 379 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 POC1BQ8TC44 478 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 DPCDQ9BVM2 203 aaPredicted RBP20.27■□□□□ 0.84
USF3-203ENST00000491165 TSPAN10Q9H1Z9 355 aaPredicted RBP20.27■□□□□ 0.84
USF3-203ENST00000491165 OR10A4Q9H209 315 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 METTL17Q9H7H0 456 aaPredicted RBP20.27■□□□□ 0.84
USF3-203ENST00000491165 TCF7L1Q9HCS4 588 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 OR5V1Q9UGF6 321 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 MOKQ9UQ07 419 aa20.27■□□□□ 0.84
USF3-203ENST00000491165 RPP14O95059 124 aaKnown RBP20.26■□□□□ 0.83
USF3-203ENST00000491165 CELA3AP09093 270 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 OR8G3PP0DMU2 310 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 PNMTP11086 282 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 IL11P20809 199 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 MAPK3P27361 379 aaPredicted RBP20.26■□□□□ 0.83
USF3-203ENST00000491165 PTH2RP49190 550 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 SELENOPP49908 381 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 AP2S1P53680 142 aaPredicted RBP20.26■□□□□ 0.83
USF3-203ENST00000491165 FOXF1Q12946 379 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 Q499Y3 187 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 SIGIRRQ6IA17 410 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 SEZ6L2Q6UXD5 910 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 RFPL4BQ6ZWI9 263 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 NLRC3Q7RTR2 1065 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 C10orf53Q8N6V4 93 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 MARVELD3Q96A59 401 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 ZNF703Q9H7S9 590 aaPredicted RBP20.26■□□□□ 0.83
USF3-203ENST00000491165 RPH3AQ9Y2J0 694 aaPredicted RBP20.26■□□□□ 0.83
USF3-203ENST00000491165 HIF3AQ9Y2N7 669 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 SLC6A5Q9Y345 797 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 TMEM72A0PK05 275 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 EFNA2O43921 213 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 ZIC3O60481 467 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 CBR3O75828 277 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 IGF2P01344 180 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 CD14P08571 375 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 SSTR2P30874 369 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 TOR2AQ5JU69 321 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 STAC2Q6ZMT1 411 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 Q6ZS92 163 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 FAM122BQ7Z309 247 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 ATG4DQ86TL0 474 aaPredicted RBP20.26■□□□□ 0.83
USF3-203ENST00000491165 ZFP62Q8NB50 900 aaPredicted RBP20.26■□□□□ 0.83
USF3-203ENST00000491165 OR5AK2Q8NH90 309 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 KLK11Q9UBX7 282 aa20.26■□□□□ 0.83
USF3-203ENST00000491165 FKBP7Q9Y680 259 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms