RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 MCEMP1Q8IX19 187 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 IL17RDQ8NFM7 739 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 MNTQ99583 582 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 NELFAQ9H3P2 528 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 ABCB9Q9NP78 766 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 PRSS50Q9UI38 385 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 LHX6Q9UPM6 363 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 SLC22A20A6NK97 555 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF879B4DU55 563 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 E9PLN8 166 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 P2RY10O00398 339 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 FAPQ12884 760 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 TAF13Q15543 124 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 C10orf128Q5T292 105 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 KLHL24Q6TFL4 600 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF454Q8N9F8 522 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 TMEM106AQ96A25 262 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 SLC30A2Q9BRI3 323 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 MMP27Q9H306 513 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 GPR35Q9HC97 309 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 SMURF1Q9HCE7 757 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 PNRC2Q9NPJ4 139 aaKnown RBP12.25□□□□□ -0.45
SMPD4-219ENST00000491128 AKIP1Q9NQ31 210 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF319Q9P2F9 582 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 MALT1Q9UDY8 824 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 TRAV8-7A0A075B6U6 113 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 C1QTNF9BB2RNN3 333 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 LOC110117498-PIK3R3F6TDL0 507 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 MAS1P04201 325 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 C1QTNF9P0C862 333 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 HSD11B1P28845 292 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 CXADRP78310 365 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 TBR1Q16650 682 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 TEX30Q5JUR7 227 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF585AQ6P3V2 769 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 MFSD4AQ8N468 514 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 TSEN15Q8WW01 171 aaKnown RBP12.25□□□□□ -0.45
SMPD4-219ENST00000491128 G6PC2Q9NQR9 355 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 RRP8O43159 456 aaKnown RBP12.24□□□□□ -0.45
SMPD4-219ENST00000491128 ATP6V1G1O75348 118 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF84P51523 738 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 CLDN12P56749 244 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 HSD17B12Q53GQ0 312 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 AKR7LQ8NHP1 331 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 PNPLA2Q96AD5 504 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 NXF2Q9GZY0 626 aaKnown RBP12.24□□□□□ -0.45
SMPD4-219ENST00000491128 OR52A1Q9UKL2 312 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 B3GNT3Q9Y2A9 372 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 MKRN2OSH3BPM6 223 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 K7ENP7 123 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 SRSF10O75494 262 aaKnown RBP12.24□□□□□ -0.45
SMPD4-219ENST00000491128 YES1P07947 543 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 CPN1P15169 458 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 SRMP19623 302 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 SDHBP21912 280 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 MYL9P24844 172 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 TNFSF8P32971 234 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 S100A5P33763 92 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 SFRP5Q5T4F7 317 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 INO80CQ6PI98 192 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-219ENST00000491128 IGFL3Q6UXB1 125 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 Q6ZS92 163 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 CATSPERDQ86XM0 798 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 DERL3Q96Q80 235 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 FOXB1Q99853 325 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 ATF6BQ99941 703 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 COMMD4Q9H0A8 199 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 SLCO5A1Q9H2Y9 848 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 PLEK2Q9NYT0 353 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 RCE1Q9Y256 329 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 R4GMQ9 66 aa12.24□□□□□ -0.45
SMPD4-219ENST00000491128 CLDN25C9JDP6 229 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 HPGDSO60760 199 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 IGHG3P01860 377 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 AZGP1P25311 298 aaKnown RBP12.23□□□□□ -0.45
SMPD4-219ENST00000491128 BCL2A1Q16548 175 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 YIF1BQ5BJH7 314 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF774Q6NX45 483 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 P4HA3Q7Z4N8 544 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 SIAH3Q8IW03 269 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 SKA3Q8IX90 412 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 RPRMLQ8N4K4 120 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 RPS4Y2Q8TD47 263 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 GFI1Q99684 422 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 MIXL1Q9H2W2 232 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 TMEM38BQ9NVV0 291 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 FAM206AQ9NX38 181 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 IGKV3D-15A0A087WSY6 115 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 MAGEB3O15480 346 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 UCHL1P09936 223 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 ABOP16442 354 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 SLC6A9P48067 706 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF121P58317 390 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-219ENST00000491128 ARF1P84077 181 aaKnown RBP12.23□□□□□ -0.45
SMPD4-219ENST00000491128 IFITM3Q01628 133 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 Q499Y3 187 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 HES5Q5TA89 166 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 C16orf87Q6PH81 154 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF813Q6ZN06 617 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms