RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 LPAR3Q9UBY5 353 aa17.4■□□□□ 0.38
SNAPC3-206ENST00000490969 PILRAQ9UKJ1 303 aa17.4■□□□□ 0.38
SNAPC3-206ENST00000490969 SLC22A13Q9Y226 551 aa17.4■□□□□ 0.38
SNAPC3-206ENST00000490969 COLEC10Q9Y6Z7 277 aa17.4■□□□□ 0.38
SNAPC3-206ENST00000490969 TRBV6-7A0A0A0MS04 114 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 C13orf42A0A1B0GVH6 325 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 C1orf196B1AJZ1 125 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 ABCD3P28288 659 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 PGDP52209 483 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 RBM39Q14498 530 aaKnown RBP17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 ZNF600Q6ZNG1 722 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 ZDHHC22Q8N966 263 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 RRNAD1Q96FB5 475 aaKnown RBP17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 MOGAT1Q96PD6 335 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 SMCO4Q9NRQ5 59 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 CGGBP1Q9UFW8 167 aaPredicted RBP17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 KCNG2Q9UJ96 466 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 GTF2A1LQ9UNN4 478 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 FITM1A5D6W6 292 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 ADH1BP00325 375 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 CSTAP01040 98 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 S100A6P06703 90 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 ZNHIT3Q15649 155 aaPredicted RBP17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 ZNF74Q16587 644 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 MESTQ5EB52 335 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 FDX2Q6P4F2 183 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 ADGRE4PQ86SQ3 457 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 LMF2Q9BU23 707 aaKnown RBP17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 EGLN1Q9GZT9 426 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 ELOVL3Q9HB03 270 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 GRHPRQ9UBQ7 328 aa17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 MRPS18BQ9Y676 258 aaKnown RBP17.39■□□□□ 0.37
SNAPC3-206ENST00000490969 A0A1W2PQU0 124 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 SFTA3P0C7M3 94 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 CAV2P51636 162 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 EIF2S3LQ2VIR3 472 aaKnown RBP17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 NAA40Q86UY6 237 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 ZSCAN4Q8NAM6 433 aaPredicted RBP17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 NUDCD2Q8WVJ2 157 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 PPP1R14AQ96A00 147 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 RNF126Q9BV68 326 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 DHDHQ9UQ10 334 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 MUC3AQ02505 3323 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 LAMA1P25391 3075 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 NPIPB9F8W1W9 429 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 STK17BO94768 372 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 TXNDC12O95881 172 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 ERCC1P07992 297 aaPredicted RBP17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 PAX6P26367 422 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 SERPINF1P36955 418 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 ARRB1P49407 418 aaPredicted RBP17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 ADPRHP54922 357 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 GPR18Q14330 331 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 OR10K2Q6IF99 312 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 FAHD2BQ6P2I3 314 aaPredicted RBP17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 C15orf54Q8N8G6 183 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 ADAD2Q8NCV1 583 aaKnown RBP17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 PHOSPHO1Q8TCT1 267 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 C14orf79Q96F83 325 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 FAHD2AQ96GK7 314 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 ZNF587Q96SQ5 575 aaPredicted RBP17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 OR51M1Q9H341 326 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 SEBOXQ9HB31 216 aaPredicted RBP17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 TAS2R4Q9NYW5 299 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 CKLFQ9UBR5 152 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 SLC17A4Q9Y2C5 497 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 HEBP2Q9Y5Z4 205 aa17.38■□□□□ 0.37
SNAPC3-206ENST00000490969 A0A0A6YYH2 397 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 A6NJ64 397 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 PHYHO14832 338 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 SLC31A1O15431 190 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 GUSBP08236 651 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 IFI6P09912 130 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 TCEA2Q15560 299 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 MEP1BQ16820 701 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 OTPQ5XKR4 325 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 CMKLR1Q99788 373 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 SYT4Q9H2B2 425 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 SEC61A2Q9H9S3 476 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 COLQQ9Y215 455 aaPredicted RBP17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 PCDHGA1Q9Y5H4 931 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 RNASEK-C17orf49H0YIS7 233 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 TO15178 435 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 YKT6O15498 198 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 MBTPS2O43462 519 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 SSX5O60225 188 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 DUS4LO95620 317 aaKnown RBP17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 ZNF44P15621 663 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 AKR1C4P17516 323 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 MPZP25189 248 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 PPT1P50897 306 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 EEF1A1P5Q5VTE0 462 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 ZNF704Q6ZNC4 412 aaPredicted RBP17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 TMPPEQ6ZT21 453 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 SLC29A4Q7RTT9 530 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 OTOSQ8NHW6 89 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 ANKRD9Q96BM1 317 aaPredicted RBP17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 TSPAN32Q96QS1 320 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 OR8B4Q96RC9 309 aa17.37■□□□□ 0.37
SNAPC3-206ENST00000490969 SRMSQ9H3Y6 488 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms