RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 A0A1W2PPR1 153 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 ATP6V1G2-DDX39BF2Z307 99 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 SPARCP09486 303 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 APEX1P27695 318 aaKnown RBP13.7□□□□□ -0.22
TRA2A-208ENST00000490942 CALCRP30988 508 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 GLRXP35754 106 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 CAPGP40121 348 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 RAD52P43351 418 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 HSPA13P48723 471 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 GALK2Q01415 458 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 KRTAP27-1Q3LI81 207 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 ZNF691Q5VV52 312 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 ERI1Q8IV48 349 aaKnown RBP13.7□□□□□ -0.22
TRA2A-208ENST00000490942 ENTHD1Q8IYW4 607 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 KBTBD8Q8NFY9 601 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 LILRB1Q8NHL6 650 aaPredicted RBP13.7□□□□□ -0.22
TRA2A-208ENST00000490942 AKR7LQ8NHP1 331 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 ST7LQ8TDW4 575 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 AKAP1Q92667 903 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRA2A-208ENST00000490942 TFAP2CQ92754 450 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 FBXW5Q969U6 566 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 ZMYND19Q96E35 227 aaPredicted RBP13.7□□□□□ -0.22
TRA2A-208ENST00000490942 MAP6Q96JE9 813 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 ZNF582Q96NG8 517 aaPredicted RBP13.7□□□□□ -0.22
TRA2A-208ENST00000490942 CNN2Q99439 309 aaKnown RBP13.7□□□□□ -0.22
TRA2A-208ENST00000490942 ATF6BQ99941 703 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 DHRS9Q9BPW9 319 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 BCL2L14Q9BZR8 327 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 PNRC2Q9NPJ4 139 aaKnown RBP13.7□□□□□ -0.22
TRA2A-208ENST00000490942 TBCCD1Q9NVR7 557 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 CISD1Q9NZ45 108 aaKnown RBP13.7□□□□□ -0.22
TRA2A-208ENST00000490942 FBXO9Q9UK97 447 aaPredicted RBP13.7□□□□□ -0.22
TRA2A-208ENST00000490942 CENPEQ02224 2701 aa13.7□□□□□ -0.22
TRA2A-208ENST00000490942 PLCE1Q9P212 2302 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 LOC100509620A0A075B734 347 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 M0R129 80 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 PHYHO14832 338 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 SLC15A1P46059 708 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 HTR5AP47898 357 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 RGS6P49758 472 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 HGFACQ04756 655 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 SPOCK1Q08629 439 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 DBPQ10586 325 aaPredicted RBP13.69□□□□□ -0.22
TRA2A-208ENST00000490942 CORO6Q6QEF8 472 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 LYPD4Q6UWN0 246 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 CFAP77Q6ZQR2 320 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 DPY19L4Q7Z388 723 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 DCXRQ7Z4W1 244 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.69□□□□□ -0.22
TRA2A-208ENST00000490942 LINC00346Q8IVM7 164 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 OR6N2Q8NGY6 317 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 RNF133Q8WVZ7 376 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 COG8Q96MW5 612 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 CA10Q9NS85 328 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 CLN6Q9NWW5 311 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 EIF3KQ9UBQ5 218 aaKnown RBP13.69□□□□□ -0.22
TRA2A-208ENST00000490942 POU2F3Q9UKI9 436 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 ROS1P08922 2347 aa13.69□□□□□ -0.22
TRA2A-208ENST00000490942 C5orf49A4QMS7 147 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 ZNF878C9JN71 531 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 E7EQL1 145 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 H3BSA7 217 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 PLAUP00749 431 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 APOC1P02654 83 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 SBK2P0C263 348 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 ALOX5APP20292 161 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 APOBEC3AP31941 199 aaPredicted RBP13.68□□□□□ -0.22
TRA2A-208ENST00000490942 OTX1P32242 354 aaPredicted RBP13.68□□□□□ -0.22
TRA2A-208ENST00000490942 ISL1P61371 349 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 DEGS2Q6QHC5 323 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 USP51Q70EK9 711 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 CYGBQ8WWM9 190 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 ASB17Q8WXJ9 295 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 NINJ1Q92982 152 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 SPTSSAQ969W0 71 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 ABHD6Q9BV23 337 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 ELOVL3Q9HB03 270 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 ADGRL4Q9HBW9 690 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 PCDHGB1Q9Y5G3 927 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 ATP23Q9Y6H3 246 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 ABCA12Q86UK0 2595 aa13.68□□□□□ -0.22
TRA2A-208ENST00000490942 SELENOFO60613 162 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 ENTPD6O75354 484 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 LYNP07948 512 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 DCTDP32321 178 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 VHLP40337 213 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 MTNR1AP48039 350 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 EVX1P49640 407 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 UCP2P55851 309 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 GRB2P62993 217 aaKnown RBP13.67□□□□□ -0.22
TRA2A-208ENST00000490942 ROM1Q03395 351 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 EIF2B1Q14232 305 aaKnown RBP13.67□□□□□ -0.22
TRA2A-208ENST00000490942 MAD2L1BPQ15013 274 aaPredicted RBP13.67□□□□□ -0.22
TRA2A-208ENST00000490942 EFNB3Q15768 340 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 OTPQ5XKR4 325 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 KCTD18Q6PI47 426 aaPredicted RBP13.67□□□□□ -0.22
TRA2A-208ENST00000490942 PAMR1Q6UXH9 720 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 B3GLCTQ6Y288 498 aa13.67□□□□□ -0.22
TRA2A-208ENST00000490942 BCDIN3DQ7Z5W3 292 aaKnown RBP13.67□□□□□ -0.22
TRA2A-208ENST00000490942 DTX2Q86UW9 622 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms