RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 IKZF2Q9UKS7 526 aa11.57□□□□□ -0.56
SNX12-205ENST00000490561 COPS3Q9UNS2 423 aa11.57□□□□□ -0.56
SNX12-205ENST00000490561 ESPL1Q14674 2120 aa11.57□□□□□ -0.56
SNX12-205ENST00000490561 CHD6Q8TD26 2715 aa11.57□□□□□ -0.56
SNX12-205ENST00000490561 OR6C6A6NF89 314 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 RER1O15258 196 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 DOK2O60496 412 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 ZG16O60844 167 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 HLA-HP01893 362 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 H2BFMP0C1H6 154 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 LIMS3P0CW19 117 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 LIMS4P0CW20 117 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 OPRL1P41146 370 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 RPS27P42677 84 aaKnown RBP11.56□□□□□ -0.56
SNX12-205ENST00000490561 ETV1P50549 477 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 RIDAP52758 137 aaKnown RBP11.56□□□□□ -0.56
SNX12-205ENST00000490561 HCCSP53701 268 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 PSG4Q00888 419 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 PPA1Q15181 289 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 CCDC92Q53HC0 331 aaPredicted RBP11.56□□□□□ -0.56
SNX12-205ENST00000490561 PABPC1L2AQ5JQF8 200 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 CORO6Q6QEF8 472 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 CFAP77Q6ZQR2 320 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 VASH1Q7L8A9 365 aaPredicted RBP11.56□□□□□ -0.56
SNX12-205ENST00000490561 LHFPL3Q86UP9 236 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 SPARTQ8N0X7 666 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 NANOGP1Q8N7R0 232 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 WDR31Q8NA23 367 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 OR1J2Q8NGS2 313 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 OR1F12Q8NHA8 337 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 HTRA1Q92743 480 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 SPTSSAQ969W0 71 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 MAP6Q96JE9 813 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 DCLRE1CQ96SD1 692 aaKnown RBP11.56□□□□□ -0.56
SNX12-205ENST00000490561 ATF6BQ99941 703 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 WNT5BQ9H1J7 359 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 SP140LQ9H930 580 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 NGBQ9NPG2 151 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 CENPMQ9NSP4 180 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 NDRG3Q9UGV2 375 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 KLHDC2Q9Y2U9 406 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 SLC25A15Q9Y619 301 aa11.56□□□□□ -0.56
SNX12-205ENST00000490561 NCOA6Q14686 2063 aaPredicted RBP11.56□□□□□ -0.56
SNX12-205ENST00000490561 ACOD1A6NK06 481 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 TRIM64CA6NLI5 447 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 SYNGR3O43761 229 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 RPSAP08865 295 aaKnown RBP11.55□□□□□ -0.56
SNX12-205ENST00000490561 HTR1AP08908 422 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 PSKH1P11801 424 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 HSD11B1P28845 292 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 APLNRP35414 380 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 HTR5AP47898 357 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 GBX2P52951 348 aaPredicted RBP11.55□□□□□ -0.56
SNX12-205ENST00000490561 WNT4P56705 351 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 TAS2R43P59537 309 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 BDH1Q02338 343 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 PIGFQ07326 219 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 TSC22D1Q15714 1073 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 ZNF829Q3KNS6 432 aaPredicted RBP11.55□□□□□ -0.56
SNX12-205ENST00000490561 ZNF684Q5T5D7 378 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 OTPQ5XKR4 325 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 TMEM154Q6P9G4 183 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 ZNF367Q7RTV3 350 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 MDP1Q86V88 176 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 YIPF7Q8N8F6 280 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 IL17RDQ8NFM7 739 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 SMAP2Q8WU79 429 aaPredicted RBP11.55□□□□□ -0.56
SNX12-205ENST00000490561 SGCDQ92629 289 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 KCNJ15Q99712 375 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 ZNF649Q9BS31 505 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 ELOVL3Q9HB03 270 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 ISYNA1Q9NPH2 558 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 PNRC2Q9NPJ4 139 aaKnown RBP11.55□□□□□ -0.56
SNX12-205ENST00000490561 TRIM36Q9NQ86 728 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 SLCO1C1Q9NYB5 712 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 CRNNQ9UBG3 495 aaPredicted RBP11.55□□□□□ -0.56
SNX12-205ENST00000490561 SCOCQ9UIL1 159 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 GNG8Q9UK08 70 aa11.55□□□□□ -0.56
SNX12-205ENST00000490561 RP1L1Q8IWN7 2480 aaPredicted RBP11.55□□□□□ -0.56
SNX12-205ENST00000490561 KALRNO60229 2985 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 NKX2-6A6NCS4 301 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 J3QKU1 62 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 J3QLW9 94 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 AGFG2O95081 481 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 IGKV3-15P01624 115 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 SERPINA5P05154 406 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 ZNF19P17023 458 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 CCKARP32238 428 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 GDI2P50395 445 aaKnown RBP11.54□□□□□ -0.56
SNX12-205ENST00000490561 CDH15P55291 814 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 TPTEP56180 551 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 TBC1D28Q2M2D7 210 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 CCDC58Q4VC31 144 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 UBE2UQ5VVX9 321 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 ZNF774Q6NX45 483 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 ARL9Q6T311 187 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 LRRN1Q6UXK5 716 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 SSX6Q7RTT6 188 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 OR10S1Q8NGN2 331 aa11.54□□□□□ -0.56
SNX12-205ENST00000490561 FGFBP3Q8TAT2 258 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms