RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CRIP3Q6Q6R5 217 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 RANBP3LQ86VV4 465 aaPredicted RBP11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 OR13G1Q8NGZ3 307 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 WIPF2Q8TF74 440 aaPredicted RBP11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 NSMAFQ92636 917 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 SEPHS2Q99611 448 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 SSX3Q99909 188 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 TMEM43Q9BTV4 400 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 AKTIPQ9H8T0 292 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 ONECUT1Q9UBC0 465 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 KPTNQ9Y664 436 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 PCLOQ9Y6V0 5065 aa11.16□□□□□ -0.62
EXOSC3-207ENST00000490516 MEIOCA2RUB1 952 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 COPEO14579 308 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 CHST1O43916 411 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 FAM20BO75063 409 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 PF4V1P10720 104 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 ZNF26P17031 533 aaPredicted RBP11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 EEF1B2P24534 225 aaKnown RBP11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 LMO1P25800 156 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 LAP3P28838 519 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 CDH12P55289 794 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 NME5P56597 212 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 DPY19L1Q2PZI1 675 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 FAM27BQ5VT28 67 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 OR2T2Q6IF00 324 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 METAP1DQ6UB28 335 aaPredicted RBP11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 C10orf111Q8N326 155 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 FGFRL1Q8N441 504 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 OR8G5Q8NG78 346 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 C17orf50Q8WW18 174 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 RORBQ92753 470 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 PTP4A1Q93096 173 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 NKX3-1Q99801 234 aaPredicted RBP11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 ZNF702PQ9H963 129 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 TIMM10BQ9Y5J6 103 aa11.15□□□□□ -0.62
EXOSC3-207ENST00000490516 TPST1O60507 370 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 TPST2O60704 377 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 PF4P02776 101 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 HLA-DPB1P04440 258 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 NUDT7P0C024 238 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 RAC2P15153 192 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 ACADSP16219 412 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 TUBG1P23258 451 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 CLNS1AP54105 237 aaKnown RBP11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 GUCA2AQ02747 115 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 DCTN2Q13561 401 aaKnown RBP11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 ZNF74Q16587 644 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 CLEC12AQ5QGZ9 265 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 C1orf94Q6P1W5 598 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 MEPCEQ7L2J0 689 aaKnown RBP11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 BOLLQ8N9W6 283 aaKnown RBP11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 ASB10Q8WXI3 467 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 OR52E6Q96RD3 313 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 ASCL2Q99929 193 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 WFDC6Q9BQY6 131 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 NPFFR1Q9GZQ6 430 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 TMEM27Q9HBJ8 222 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 TUBG2Q9NRH3 451 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 C20orf141Q9NUB4 165 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 UFSP2Q9NUQ7 469 aa11.14□□□□□ -0.63
EXOSC3-207ENST00000490516 MCIDASD6RGH6 385 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 DVL1O14640 695 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 RIPK2O43353 540 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 DUS4LO95620 317 aaKnown RBP11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 CHRM2P08172 466 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 CST2P09228 141 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 LYL1P12980 280 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 PAX6P26367 422 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 IL12AP29459 219 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 NCALDP61601 193 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 UFM1P61960 85 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 MAB21L1Q13394 359 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 PRAMEF6Q5VXH4 476 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 CNPY4Q8N129 248 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 C4orf33Q8N1A6 199 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 BHLHE23Q8NDY6 225 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 BEND2Q8NDZ0 799 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 OR11L1Q8NGX0 322 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 Q8TCH9 128 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 SLC7A13Q8TCU3 470 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 ST8SIA4Q92187 359 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 MAL2Q969L2 176 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 NMD3Q96D46 503 aaKnown RBP11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 OR5M11Q96RB7 305 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 DDOQ99489 341 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 CHID1Q9BWS9 393 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 NUF2Q9BZD4 464 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 PCDHAC1Q9H158 963 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 BCL2L10Q9HD36 194 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 NANSQ9NR45 359 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 INPP5EQ9NRR6 644 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 PTTG3PQ9NZH4 202 aa11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 NKX1-2Q9UD57 310 aaPredicted RBP11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 NDRG4Q9ULP0 352 aaKnown RBP11.13□□□□□ -0.63
EXOSC3-207ENST00000490516 WDR91A4D1P6 747 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 TMEM247A6NEH6 219 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 BLOC1S5-TXNDC5H3BN57 136 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 HDAC3O15379 428 aa11.12□□□□□ -0.63
EXOSC3-207ENST00000490516 GYPAP02724 150 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms