RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 RPRD1BQ9NQG5 326 aaKnown RBP16.84■□□□□ 0.29
SMC4-222ENST00000490207 DECR2Q9NUI1 292 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 TBCCD1Q9NVR7 557 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 CGGBP1Q9UFW8 167 aaPredicted RBP16.84■□□□□ 0.29
SMC4-222ENST00000490207 B9D1Q9UPM9 204 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 OR6C6A6NF89 314 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 PPIHO43447 177 aaKnown RBP16.83■□□□□ 0.28
SMC4-222ENST00000490207 IDH3BO43837 385 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 CUBNO60494 3623 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 CDC14BO60729 498 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 CCNB2O95067 398 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 TGFAP01135 160 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 FAM157CP0CG43 387 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 GSTM3P21266 225 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 MMP15P51511 669 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 MS4A2Q01362 244 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 TEKQ02763 1124 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 MEP1BQ16820 701 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 FAM98BQ52LJ0 330 aaKnown RBP16.83■□□□□ 0.28
SMC4-222ENST00000490207 CCDC92Q53HC0 331 aaPredicted RBP16.83■□□□□ 0.28
SMC4-222ENST00000490207 CLEC12AQ5QGZ9 265 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 OR1F12Q8NHA8 337 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 SLC7A6Q92536 515 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 ASB9Q96DX5 294 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 CLPTM1LQ96KA5 538 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 LRGUKQ96M69 825 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 C1orf21Q9H246 121 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 POFUT1Q9H488 388 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 SAP30LQ9HAJ7 183 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 SRA1Q9HD15 236 aaKnown RBP16.83■□□□□ 0.28
SMC4-222ENST00000490207 CYSLTR2Q9NS75 346 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 ATPIF1Q9UII2 106 aa16.83■□□□□ 0.28
SMC4-222ENST00000490207 IGHV1-69-2A0A0G2JMI3 117 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 ZSCAN5BA6NJL1 495 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 RER1O15258 196 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 SPRY3O43610 288 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 TIMM8AO60220 97 aaPredicted RBP16.82■□□□□ 0.28
SMC4-222ENST00000490207 IFNA2P01563 188 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 IGHV1-46P01743 117 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 TMEM33P57088 247 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMC4-222ENST00000490207 PPP1R8Q12972 351 aaKnown RBP16.82■□□□□ 0.28
SMC4-222ENST00000490207 ZMAT1Q5H9K5 638 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 FAM209AQ5JX71 171 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 ZNF770Q6IQ21 691 aaPredicted RBP16.82■□□□□ 0.28
SMC4-222ENST00000490207 USP51Q70EK9 711 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 OR6V1Q8N148 313 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 LINC01356Q8N9X3 169 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 AQP11Q8NBQ7 271 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 SLC26A10Q8NG04 563 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 OR52E2Q8NGJ4 325 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 CLDND2Q8NHS1 167 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 POP5Q969H6 163 aaKnown RBP16.82■□□□□ 0.28
SMC4-222ENST00000490207 REEP1Q9H902 201 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 VNN3Q9NY84 501 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 FAM53CQ9NYF3 392 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 TAS2R1Q9NYW7 299 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 GRIP1Q9Y3R0 1128 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 SAMHD1Q9Y3Z3 626 aaKnown RBP16.82■□□□□ 0.28
SMC4-222ENST00000490207 LHFPL6Q9Y693 200 aa16.82■□□□□ 0.28
SMC4-222ENST00000490207 OR6C68A6NDL8 312 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 LIPAP38571 399 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 CRYBB2P43320 205 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 CDH15P55291 814 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 DBPQ10586 325 aaPredicted RBP16.81■□□□□ 0.28
SMC4-222ENST00000490207 SLC35F1Q5T1Q4 408 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 OR2T5Q6IEZ7 315 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 TRPM8Q7Z2W7 1104 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 ZBTB46Q86UZ6 589 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 GJC3Q8NFK1 279 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 OR2T29Q8NH02 315 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 ELMOD3Q96FG2 381 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 C1orf159Q96HA4 380 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 THTPAQ9BU02 230 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 PLA2G12AQ9BZM1 189 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 HDHD2Q9H0R4 259 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 TBC1D23Q9NUY8 699 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 U3KQV3 271 aa16.81■□□□□ 0.28
SMC4-222ENST00000490207 BHLHE40O14503 412 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 GASTP01350 101 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 TFP02787 698 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 DBHP09172 617 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 HNF1AP20823 631 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 TUBG1P23258 451 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 HIST1H3AP68431 136 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 COX10Q12887 443 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 PSG7Q13046 419 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 SLC36A3Q495N2 470 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 FAM120AOSQ5T036 256 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 HIST2H3PS2Q5TEC6 136 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 RASSF6Q6ZTQ3 369 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 IL17RELQ6ZVW7 336 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 HIST2H3AQ71DI3 136 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 OR8D4Q8NGM9 314 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 BCAS4Q8TDM0 211 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 COG8Q96MW5 612 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 DCLRE1CQ96SD1 692 aaKnown RBP16.8■□□□□ 0.28
SMC4-222ENST00000490207 COQ7Q99807 217 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 TUBG2Q9NRH3 451 aa16.8■□□□□ 0.28
SMC4-222ENST00000490207 CLDN25C9JDP6 229 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms