RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 MELTFP08582 738 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 CD247P20963 164 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 LAP3P28838 519 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 AQP2P41181 271 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 RBM34P42696 430 aaKnown RBP6.83□□□□□ -1.32
USP39-216ENST00000490193 CD47Q08722 323 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 ENDOGQ14249 297 aaKnown RBP6.83□□□□□ -1.32
USP39-216ENST00000490193 SGCAQ16586 387 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 ZNF404Q494X3 552 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 GPR157Q5UAW9 335 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 BRD3OSQ6XYD6 125 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 ZNF620Q6ZNG0 422 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 PTOV1Q86YD1 416 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 RBM45Q8IUH3 476 aaKnown RBP6.83□□□□□ -1.32
USP39-216ENST00000490193 C11orf65Q8NCR3 313 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 LINC01006Q8NI28 216 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 DYRK2Q92630 601 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 HAVCR1Q96D42 359 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 SPDL1Q96EA4 605 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 MAGEB18Q96M61 343 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 COG8Q96MW5 612 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 PAIP2Q9BPZ3 127 aaKnown RBP6.83□□□□□ -1.32
USP39-216ENST00000490193 CPPED1Q9BRF8 314 aaPredicted RBP6.83□□□□□ -1.32
USP39-216ENST00000490193 SLC30A2Q9BRI3 323 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 NUDT16L1Q9BRJ7 211 aaKnown RBP6.83□□□□□ -1.32
USP39-216ENST00000490193 TMEM246Q9BRR3 403 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 ALG12Q9BV10 488 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 TXNIPQ9H3M7 391 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 POFUT1Q9H488 388 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 MARCH7Q9H992 704 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 KCNK9Q9NPC2 374 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 RNF114Q9Y508 228 aa6.83□□□□□ -1.32
USP39-216ENST00000490193 A0A1B0GWJ7 208 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 C12orf71A8MTZ7 269 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 J3QW42 95 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 M0QX08 132 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 PHYHO14832 338 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 TSPAN15O95858 294 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 OPN1SWP03999 348 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 THRBP10828 461 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 RAC2P15153 192 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 FUT1P19526 365 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 MSR1P21757 451 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 PITPNBP48739 271 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 SLC18A1P54219 525 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 STX1BP61266 288 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 FGF12P61328 243 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 RUNDC3AQ59EK9 446 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 SLC27A4Q6P1M0 643 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 WDR93Q6P2C0 686 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 EPGNQ6UW88 154 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 DLEU7Q6UYE1 221 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 NLRC3Q7RTR2 1065 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 PATL1Q86TB9 770 aaKnown RBP6.82□□□□□ -1.32
USP39-216ENST00000490193 SLC30A8Q8IWU4 369 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 OR8B3Q8NGG8 313 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 MOSPD2Q8NHP6 518 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 SSMEM1Q8WWF3 244 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 NSMAFQ92636 917 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 CMBLQ96DG6 245 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 MEGF10Q96KG7 1140 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 RBP7Q96R05 134 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 OR8B2Q96RD0 313 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 POLR2J2Q9GZM3 115 aaKnown RBP6.82□□□□□ -1.32
USP39-216ENST00000490193 POLR2J3Q9H1A7 115 aaKnown RBP6.82□□□□□ -1.32
USP39-216ENST00000490193 ASH2LQ9UBL3 628 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 HIF3AQ9Y2N7 669 aa6.82□□□□□ -1.32
USP39-216ENST00000490193 HTR3EA5X5Y0 456 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 C5orf63A6NC05 138 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 P2RY10O00398 339 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 ENSAO43768 121 aaKnown RBP6.81□□□□□ -1.32
USP39-216ENST00000490193 GPR137BO60478 399 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 ALX3O95076 343 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 MMP9P14780 707 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 PSMB10P40306 273 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 ERFP50548 548 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 RPL27P61353 136 aaKnown RBP6.81□□□□□ -1.32
USP39-216ENST00000490193 GUCY1A3Q02108 690 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 SCRN3Q0VDG4 424 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 C2orf68Q2NKX9 166 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 BEAN1Q3B7T3 259 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 KPRPQ5T749 579 aaPredicted RBP6.81□□□□□ -1.32
USP39-216ENST00000490193 WDR25Q64LD2 544 aaPredicted RBP6.81□□□□□ -1.32
USP39-216ENST00000490193 FBXW12Q6X9E4 464 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 ZNF841Q6ZN19 808 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 DCDC5Q6ZRR9 648 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 LDLRAD3Q86YD5 345 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 C1QL4Q86Z23 238 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 NKAIN4Q8IVV8 208 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 C1orf87Q8N0U7 546 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 ANKRD42Q8N9B4 389 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 ZSCAN4Q8NAM6 433 aaPredicted RBP6.81□□□□□ -1.32
USP39-216ENST00000490193 PCYOX1LQ8NBM8 494 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 PFN4Q8NHR9 129 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 ZNF420Q8TAQ5 688 aaPredicted RBP6.81□□□□□ -1.32
USP39-216ENST00000490193 TBC1D15Q8TC07 691 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 LRRC8CQ8TDW0 803 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 TMEM239Q8WW34 195 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 RASSF5Q8WWW0 418 aa6.81□□□□□ -1.32
USP39-216ENST00000490193 EDARADDQ8WWZ3 215 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms