RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 GTF2E2P29084 291 aaKnown RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 EPHX2P34913 555 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 RAB25P57735 213 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 PSMC5P62195 406 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 LSM3P62310 102 aaKnown RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 SNRPD2P62316 118 aaKnown RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF45Q02386 682 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 INCA1Q0VD86 236 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 PEX6Q13608 980 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 PNCKQ6P2M8 343 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 ERICH5Q6P6B1 374 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 TPGS1Q6ZTW0 290 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 CYS1Q717R9 158 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 PTAR1Q7Z6K3 402 aaPredicted RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 LUZP2Q86TE4 346 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 PGAM4Q8N0Y7 254 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 CYP4Z2PQ8N1L4 340 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 METTL4Q8N3J2 472 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 CBR4Q8N4T8 237 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 OR1K1Q8NGR3 316 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 OR13C5Q8NGS8 318 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 TFB1MQ8WVM0 346 aaKnown RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 TNFRSF14Q92956 283 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 TOMM40LQ969M1 308 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 NABP1Q96AH0 204 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 NARS2Q96I59 477 aaKnown RBP2.4□□□□□ -2.03
UBXN4-208ENST00000490163 PPP1R36Q96LQ0 422 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 EBF4Q9BQW3 602 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF251Q9BRH9 671 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 NAT9Q9BTE0 207 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 ZYG11BQ9C0D3 744 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 IMPAD1Q9NX62 359 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 NYAP2Q9P242 653 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 KIF25Q9UIL4 384 aa2.4□□□□□ -2.03
UBXN4-208ENST00000490163 TTC3P53804 2025 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 MYH9P35579 1960 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 VWA8A3KMH1 1905 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 TMEM131Q92545 1883 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 hCG_38984A0A1B0GV85 526 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 GFYI3L273 518 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 PDHXO00330 501 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 DFNA5O60443 496 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 WBP4O75554 376 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RBBP9O75884 186 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 IFNA4P05014 189 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 DAOP14920 347 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RPS3P23396 243 aaKnown RBP eCLIP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 FASP25445 335 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 CD82P27701 267 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 GCAP28676 217 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 PDHA2P29803 388 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 HMGCLP35914 325 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RPL14P50914 215 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 KCNK10P57789 538 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 DEFA6Q01524 100 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 OC90Q02509 493 aaPredicted RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF763Q0D2J5 394 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 AQP6Q13520 282 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 FASTKD3Q14CZ7 662 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 QPRTQ15274 297 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 UPP1Q16831 310 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RPEL1Q2QD12 228 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RTL6Q6ICC9 239 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 C3orf33Q6P1S2 294 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF585AQ6P3V2 769 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RNASEKQ6P5S7 137 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 GDPD3Q7L5L3 318 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 P2RY8Q86VZ1 359 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 TMEM123Q8N131 208 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 STX19Q8N4C7 294 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 TMEM199Q8N511 208 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 OR52H1Q8NGJ2 320 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RBPMSQ93062 196 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 BIRC7Q96CA5 298 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 TRMT61BQ9BVS5 477 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 BEX2Q9BXY8 128 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 LHX5Q9H2C1 402 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 SLC38A1Q9H2H9 487 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 ACP6Q9NPH0 428 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 NUFIP1Q9UHK0 495 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 FBXO5Q9UKT4 447 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 NDUFAF1Q9Y375 327 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 AK6Q9Y3D8 172 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 SLC22A7Q9Y694 548 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 ZNFX1Q9P2E3 1918 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 IGSF9BQ9UPX0 1349 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 CIB4A0PJX0 185 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 MEIOCA2RUB1 952 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 EFCAB10A6NFE3 127 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 SLC22A20A6NK97 555 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 TPST1O60507 370 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 EIF4E2O60573 245 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 CRTAPO75718 401 aaPredicted RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 GNAO1P09471 354 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 SMIM6P0DI80 62 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RPS12P25398 132 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 PSMB9P28065 219 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 BRCC3P46736 316 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms