RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ZNF77Q15935 545 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 RPS19BP1Q86WX3 136 aaKnown RBP8.09□□□□□ -1.11
LSAMP-205ENST00000490035 PGBD5Q8N414 524 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 TWSG1Q9GZX9 223 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 PURGQ9UJV8 347 aaKnown RBP8.09□□□□□ -1.11
LSAMP-205ENST00000490035 EN2P19622 333 aaPredicted RBP8.09□□□□□ -1.11
LSAMP-205ENST00000490035 MMP11P24347 488 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 BAHD1Q8TBE0 780 aaPredicted RBP8.09□□□□□ -1.11
LSAMP-205ENST00000490035 PKMYT1Q99640 499 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 GINS3Q9BRX5 216 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 NUMBLQ9Y6R0 609 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 COL18A1P39060 1754 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 FRG2CA6NGY1 282 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 ACKR3P25106 362 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 HOXD11P31277 338 aaPredicted RBP8.09□□□□□ -1.11
LSAMP-205ENST00000490035 IGFBP7Q16270 282 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 H3F3CQ6NXT2 135 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 NT5CQ8TCD5 201 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 UQCC2Q9BRT2 126 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 FBXL2Q9UKC9 423 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 CA5BQ9Y2D0 317 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 RALGAPA1Q6GYQ0 2036 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 CKAP5Q14008 2032 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 SERTM1A2A2V5 107 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 BHLHE40O14503 412 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 ADPRHP54922 357 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 UBE2G1P62253 170 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 DEFB103AP81534 67 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 SLC38A6Q8IZM9 456 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 SARAFQ96BY9 339 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 GALNT9Q9HCQ5 603 aa8.09□□□□□ -1.11
LSAMP-205ENST00000490035 XRCC3O43542 346 aa8.09□□□□□ -1.12
LSAMP-205ENST00000490035 RAD1O60671 282 aa8.09□□□□□ -1.12
LSAMP-205ENST00000490035 IGLV3-25P01717 112 aa8.09□□□□□ -1.12
LSAMP-205ENST00000490035 PMP2P02689 132 aa8.09□□□□□ -1.12
LSAMP-205ENST00000490035 CLN3Q13286 438 aa8.09□□□□□ -1.12
LSAMP-205ENST00000490035 ALKAL2Q6UX46 152 aa8.09□□□□□ -1.12
LSAMP-205ENST00000490035 C6orf15Q6UXA7 325 aaPredicted RBP8.09□□□□□ -1.12
LSAMP-205ENST00000490035 FJX1Q86VR8 437 aa8.09□□□□□ -1.12
LSAMP-205ENST00000490035 LINC01599Q8WXQ3 324 aa8.09□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF251Q9BRH9 671 aa8.09□□□□□ -1.12
LSAMP-205ENST00000490035 NKX6-2Q9C056 277 aaPredicted RBP8.09□□□□□ -1.12
LSAMP-205ENST00000490035 SLC2A1P11166 492 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 COX20Q5RI15 118 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 ARRDC1Q8N5I2 433 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 OR1M1Q8NGA1 313 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 PDFQ9HBH1 243 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 GAR1Q9NY12 217 aaKnown RBP8.08□□□□□ -1.12
LSAMP-205ENST00000490035 FKBP11Q9NYL4 201 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 HMGN4O00479 90 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 PRRG2O14669 202 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 LRP5O75197 1615 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 OR5H15A6NDH6 313 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 OR5H1A6NKK0 313 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 ENSAO43768 121 aaKnown RBP8.08□□□□□ -1.12
LSAMP-205ENST00000490035 EPHA5P54756 1037 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 MED20Q9H944 212 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 TXNL1O43396 289 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 IL5P05113 134 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 EVX1P49640 407 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 CLDN20P56880 219 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 ARRDC3Q96B67 414 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 ASB16Q96NS5 453 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 NIPSNAP1Q9BPW8 284 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 P2RY10O00398 339 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 CLDN15P56746 228 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 C18orf63Q68DL7 685 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 FAM111BQ6SJ93 734 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF740Q8NDX6 193 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 SLC23A1Q9UHI7 598 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF346Q9UL40 294 aaKnown RBP8.08□□□□□ -1.12
LSAMP-205ENST00000490035 F5P12259 2224 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 PVRP15151 417 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 COX5AP20674 150 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 LBX1P52954 281 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 TLE1Q04724 770 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 SMN1Q16637 294 aaKnown RBP8.08□□□□□ -1.12
LSAMP-205ENST00000490035 FAM58AQ8N1B3 248 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 DVL1O14640 695 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 ALX3O95076 343 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 CNIH1O95406 144 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 SSTR2P30874 369 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 KCNJ3P48549 501 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 DVL1P1P54792 670 aaPredicted RBP8.08□□□□□ -1.12
LSAMP-205ENST00000490035 SQSTM1Q13501 440 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 DUSP5Q16690 384 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 TAS1R1Q7RTX1 841 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 CDH26Q8IXH8 852 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 LILRA2Q8N149 483 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 OR10P1Q8NGE3 313 aa8.08□□□□□ -1.12
LSAMP-205ENST00000490035 LILRA5A6NI73 299 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 A6NL46 340 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 FIGNL2A6NMB9 653 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 IFITM5A6NNB3 132 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 ABCD4O14678 606 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 TERTO14746 1132 aaKnown RBP8.07□□□□□ -1.12
LSAMP-205ENST00000490035 NCR1O76036 304 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 MOB1BQ7L9L4 216 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 TSEN54Q7Z6J9 526 aaKnown RBP8.07□□□□□ -1.12
LSAMP-205ENST00000490035 LURAP1Q96LR2 239 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms