RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 UBE2J2Q8N2K1 259 aa23.59■■□□□ 1.37
HOXB3-210ENST00000489475 DACH2Q96NX9 599 aa23.59■■□□□ 1.37
HOXB3-210ENST00000489475 NIPAL2Q9H841 368 aa23.59■■□□□ 1.37
HOXB3-210ENST00000489475 TMEM269A0A1B0GVZ9 245 aa23.58■■□□□ 1.37
HOXB3-210ENST00000489475 SS18L1O75177 396 aaPredicted RBP23.58■■□□□ 1.37
HOXB3-210ENST00000489475 CST2P09228 141 aa23.58■■□□□ 1.37
HOXB3-210ENST00000489475 HSD11B1P28845 292 aa23.58■■□□□ 1.37
HOXB3-210ENST00000489475 SF3B4Q15427 424 aaKnown RBP eCLIP23.58■■□□□ 1.37
HOXB3-210ENST00000489475 CATSPERDQ86XM0 798 aa23.58■■□□□ 1.37
HOXB3-210ENST00000489475 SLC22A24Q8N4F4 322 aa23.58■■□□□ 1.37
HOXB3-210ENST00000489475 ZCCHC14Q8WYQ9 949 aaKnown RBP23.58■■□□□ 1.37
HOXB3-210ENST00000489475 WNT2BQ93097 391 aa23.58■■□□□ 1.37
HOXB3-210ENST00000489475 SLC25A46Q96AG3 418 aa23.58■■□□□ 1.37
HOXB3-210ENST00000489475 PNRC2Q9NPJ4 139 aaKnown RBP23.58■■□□□ 1.37
HOXB3-210ENST00000489475 TUBD1Q9UJT1 453 aa23.58■■□□□ 1.37
HOXB3-210ENST00000489475 SRSF10O75494 262 aaKnown RBP23.57■■□□□ 1.36
HOXB3-210ENST00000489475 ACSF3Q4G176 576 aaPredicted RBP23.57■■□□□ 1.36
HOXB3-210ENST00000489475 FAM27D1Q5T7N8 215 aa23.57■■□□□ 1.36
HOXB3-210ENST00000489475 ZNF585AQ6P3V2 769 aa23.57■■□□□ 1.36
HOXB3-210ENST00000489475 RGP1Q92546 391 aaPredicted RBP23.57■■□□□ 1.36
HOXB3-210ENST00000489475 OR14A2Q96R54 314 aa23.57■■□□□ 1.36
HOXB3-210ENST00000489475 SH3GL3Q99963 347 aa23.57■■□□□ 1.36
HOXB3-210ENST00000489475 C12orf49Q9H741 205 aa23.57■■□□□ 1.36
HOXB3-210ENST00000489475 ARL6IP5O75915 188 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 MYL9P24844 172 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 MTNR1BP49286 362 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 MMP16P51512 607 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 HIST1H3AP68431 136 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 NRN1LQ496H8 165 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 HIST2H3PS2Q5TEC6 136 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 ZNF813Q6ZN06 617 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 HIST2H3AQ71DI3 136 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 FGD2Q7Z6J4 655 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 TEX19Q8NA77 164 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 IL17RDQ8NFM7 739 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 PHYHIPQ92561 330 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 FBXO17Q96EF6 278 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 PPIL3Q9H2H8 161 aaKnown RBP23.56■■□□□ 1.36
HOXB3-210ENST00000489475 MMP27Q9H306 513 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 SLC22A13Q9Y226 551 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 A3GALT2U3KPV4 340 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 FARS2O95363 451 aaKnown RBP23.56■■□□□ 1.36
HOXB3-210ENST00000489475 CLEC2LP0C7M8 214 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 GRB2P62993 217 aaKnown RBP23.56■■□□□ 1.36
HOXB3-210ENST00000489475 ODF4Q2M2E3 257 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 LINC00303Q3SY05 128 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 ABHD12BQ7Z5M8 362 aaPredicted RBP23.56■■□□□ 1.36
HOXB3-210ENST00000489475 Q8NA96 180 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 OR52A1Q9UKL2 312 aa23.56■■□□□ 1.36
HOXB3-210ENST00000489475 CACNA1AO00555 2505 aa23.55■■□□□ 1.36
HOXB3-210ENST00000489475 ZNF879B4DU55 563 aa23.55■■□□□ 1.36
HOXB3-210ENST00000489475 UNQ9370/PRO34162Q6UXP9 181 aa23.55■■□□□ 1.36
HOXB3-210ENST00000489475 GPR148Q8TDV2 347 aa23.55■■□□□ 1.36
HOXB3-210ENST00000489475 DDX28Q9NUL7 540 aaKnown RBP23.55■■□□□ 1.36
HOXB3-210ENST00000489475 SLC5A6Q9Y289 635 aa23.55■■□□□ 1.36
HOXB3-210ENST00000489475 NCOA6Q14686 2063 aaPredicted RBP23.55■■□□□ 1.36
HOXB3-210ENST00000489475 SVILO95425 2214 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 UCHL1P09936 223 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 ARF1P84077 181 aaKnown RBP23.54■■□□□ 1.36
HOXB3-210ENST00000489475 FAPQ12884 760 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 HNRNPA0Q13151 305 aaKnown RBP23.54■■□□□ 1.36
HOXB3-210ENST00000489475 Q499Y3 187 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 BCL2L15Q5TBC7 163 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 ZNF324BQ6AW86 544 aaPredicted RBP23.54■■□□□ 1.36
HOXB3-210ENST00000489475 OR2A2Q6IF42 318 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 LINC00299Q6ZSB3 139 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 RDH10Q8IZV5 341 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 GCNT2Q8N0V5 402 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 ATF6BQ99941 703 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 BARHL1Q9BZE3 327 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 NXF2Q9GZY0 626 aaKnown RBP23.54■■□□□ 1.36
HOXB3-210ENST00000489475 ATMQ13315 3056 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 A0A1W2PPK0 400 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 SHISA3A0PJX4 238 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 OCM2P0CE71 109 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 MAPK3P27361 379 aaPredicted RBP23.54■■□□□ 1.36
HOXB3-210ENST00000489475 OR3A2P47893 321 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 PCBD1P61457 104 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 SCRN3Q0VDG4 424 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 ELFN2Q5R3F8 820 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 NSUN5P2Q63ZY6 315 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 FAM214BQ7L5A3 538 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 SLC16A14Q7RTX9 510 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 CISD2Q8N5K1 135 aaKnown RBP23.54■■□□□ 1.36
HOXB3-210ENST00000489475 PPP1R14AQ96A00 147 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 C6orf62Q9GZU0 229 aaPredicted RBP23.54■■□□□ 1.36
HOXB3-210ENST00000489475 BRD7Q9NPI1 651 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 G6PC2Q9NQR9 355 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 FAM206AQ9NX38 181 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 PLEK2Q9NYT0 353 aa23.54■■□□□ 1.36
HOXB3-210ENST00000489475 MED12LQ86YW9 2145 aa23.53■■□□□ 1.36
HOXB3-210ENST00000489475 PIEZO2Q9H5I5 2752 aa23.53■■□□□ 1.36
HOXB3-210ENST00000489475 GABRA1P14867 456 aa23.53■■□□□ 1.36
HOXB3-210ENST00000489475 PSMA6P60900 246 aaKnown RBP23.53■■□□□ 1.36
HOXB3-210ENST00000489475 CCDC92Q53HC0 331 aaPredicted RBP23.53■■□□□ 1.36
HOXB3-210ENST00000489475 FBXW9Q5XUX1 488 aa23.53■■□□□ 1.36
HOXB3-210ENST00000489475 SYT9Q86SS6 491 aa23.53■■□□□ 1.36
HOXB3-210ENST00000489475 TPRA1Q86W33 373 aa23.53■■□□□ 1.36
HOXB3-210ENST00000489475 MALT1Q9UDY8 824 aa23.53■■□□□ 1.36
HOXB3-210ENST00000489475 PRSS50Q9UI38 385 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms