RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ACOT7O00154 380 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 TFECO14948 347 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 RRP8O43159 456 aaKnown RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 ZNF354AO60765 605 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 PRAF2O60831 178 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 FBXO24O75426 580 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 KLF7O75840 302 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 SCGNO76038 276 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 STK17BO94768 372 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 RPP14O95059 124 aaKnown RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 PAHP00439 452 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 IGHG1P01857 330 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 YES1P07947 543 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 SPARCP09486 303 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 TFPIP10646 304 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 LIPCP11150 499 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 IFNGR1P15260 489 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 ERP29P30040 261 aaKnown RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 FAUP35544 74 aaKnown RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 FOLR3P41439 243 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 SSR4P51571 173 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 RRAS2P62070 204 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 LCN6P62502 163 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 SLC35A1P78382 337 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 MYBPHQ13203 477 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 EIF2B1Q14232 305 aaKnown RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 GPR176Q14439 515 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 POU4F3Q15319 338 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 OR7A5Q15622 319 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 KCNJ8Q15842 424 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 KCNMB1Q16558 191 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 TBRG1Q3YBR2 411 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 SLC36A2Q495M3 483 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 WDR38Q5JTN6 314 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 ATAD3CQ5T2N8 411 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 FAM69BQ5VUD6 431 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 NHLRC1Q6VVB1 395 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 SPATC1Q76KD6 591 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 NDUFAF7Q7L592 441 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 PLCZ1Q86YW0 608 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 UEVLDQ8IX04 471 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 SPACA3Q8IXA5 215 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 CDH26Q8IXH8 852 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 OR56B4Q8NH76 319 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 PAQR8Q8TEZ7 354 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 RNF133Q8WVZ7 376 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 FCAMRQ8WWV6 532 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 ZNF486Q96H40 463 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 SLC25A44Q96H78 314 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 TMEM41AQ96HV5 264 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 C5orf34Q96MH7 638 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 OXGR1Q96P68 337 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 OR2M2Q96R28 347 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 KLHDC3Q9BQ90 382 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 ULBP3Q9BZM4 244 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 AKIRIN1Q9H9L7 192 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 MED11Q9P086 117 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 NLKQ9UBE8 527 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 MALT1Q9UDY8 824 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 ZNF107Q9UII5 783 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 HHLA2Q9UM44 414 aa7.54□□□□□ -1.2
VTI1A-207ENST00000489357 RBMX2Q9Y388 322 aaKnown RBP7.54□□□□□ -1.2
VTI1A-207ENST00000489357 AQP7P3A6NL99 342 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 SLC17A2O00624 439 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 MAGEB4O15481 346 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 EEF1E1O43324 174 aaKnown RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 XRCC3O43542 346 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 SRSF10O75494 262 aaKnown RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 PLGP00747 810 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 UMODP07911 640 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 COX6A1P12074 109 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 ARSBP15848 533 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 LAP3P28838 519 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 KIR3DL2P43630 455 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 ZNF133P52736 654 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 DSCR4P56555 118 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 POU3F1Q03052 451 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 CD300CQ08708 224 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 CHAF1BQ13112 559 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 MAB21L1Q13394 359 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 SNTB2Q13425 540 aaKnown RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 KLF9Q13886 244 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 TGIF1Q15583 401 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 FAM189A2Q15884 450 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 HIST3H3Q16695 136 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 TMEM69Q5SWH9 247 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 CD276Q5ZPR3 534 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 OLFML2AQ68BL7 652 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 GLT8D1Q68CQ7 371 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 FAM166AQ6J272 317 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 ARSKQ6UWY0 536 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 IL20RBQ6UXL0 311 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 NCCRP1Q6ZVX7 275 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 ASB18Q6ZVZ8 466 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 BTN2A1Q7KYR7 527 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 FGD2Q7Z6J4 655 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 CMTM4Q8IZR5 234 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 GHDCQ8N2G8 530 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 PRSS35Q8N3Z0 413 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms