RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 Q499Y3 187 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 HSD17B12Q53GQ0 312 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 THEM4Q5T1C6 240 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 HACD4Q5VWC8 232 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 OR5M10Q6IEU7 315 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 KCTD18Q6PI47 426 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-208ENST00000489247 IL20RBQ6UXL0 311 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 DPY19L4Q7Z388 723 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 LRRC28Q86X40 367 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-208ENST00000489247 RAB43Q86YS6 212 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 UEVLDQ8IX04 471 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 FAM83FQ8NEG4 500 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-208ENST00000489247 NOXO1Q8NFA2 376 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 NLGN4YQ8NFZ3 816 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-208ENST00000489247 OR52N5Q8NH56 324 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 PPP1R35Q8TAP8 253 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 ST7LQ8TDW4 575 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 SMAP2Q8WU79 429 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-208ENST00000489247 RNF133Q8WVZ7 376 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 KCNE4Q8WWG9 221 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 RAB24Q969Q5 203 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 MCHR2Q969V1 340 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 RNF31Q96EP0 1072 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 SLC25A44Q96H78 314 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-208ENST00000489247 ADAD1Q96M93 576 aaKnown RBP4.92□□□□□ -1.62
ATG4A-208ENST00000489247 OXGR1Q96P68 337 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 KCNS3Q9BQ31 491 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 SF3B5Q9BWJ5 86 aaKnown RBP4.92□□□□□ -1.62
ATG4A-208ENST00000489247 TPK1Q9H3S4 243 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 HPF1Q9NWY4 346 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 P4HTMQ9NXG6 502 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 FOXJ2Q9P0K8 574 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 DAPK2Q9UIK4 370 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 LAMP5Q9UJQ1 280 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 GNG8Q9UK08 70 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 TBC1D24Q9ULP9 559 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 NPIPA1Q9UND3 350 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 VDAC3Q9Y277 283 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 HEATR5AQ86XA9 2040 aa4.92□□□□□ -1.62
ATG4A-208ENST00000489247 LAMA1P25391 3075 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 CACNA1HO95180 2353 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 OR2M5A3KFT3 312 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 TRABD2BA6NFA1 517 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 FABP12A6NFH5 140 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 TVP23AA6NH52 213 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 GJE1A6NN92 205 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 AIPO00170 330 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 ZNF593O00488 134 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-208ENST00000489247 PDCD5O14737 125 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 CTDSPLO15194 276 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 MAGEB3O15480 346 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 GMFGO60234 142 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 RAD1O60671 282 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 CNOT4O95628 575 aaKnown RBP4.91□□□□□ -1.62
ATG4A-208ENST00000489247 IGHG1P01857 330 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 CSF3P09919 207 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 OR8G3PP0DMU2 310 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 CSRP1P21291 193 aaKnown RBP4.91□□□□□ -1.62
ATG4A-208ENST00000489247 AHCYP23526 432 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 RBMS1P29558 406 aaKnown RBP4.91□□□□□ -1.62
ATG4A-208ENST00000489247 KIR3DL2P43630 455 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 MEOX1P50221 254 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 PSMD7P51665 324 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 CAV3P56539 151 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 CSNK2A1P68400 391 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-208ENST00000489247 POU3F1Q03052 451 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-208ENST00000489247 FOXO1Q12778 655 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 INPP5JQ15735 1006 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-208ENST00000489247 BAK1Q16611 211 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 TBR1Q16650 682 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 MEP1BQ16820 701 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 HYAL4Q2M3T9 481 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 ACER2Q5QJU3 275 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 C10orf128Q5T292 105 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 FAM27D1Q5T7N8 215 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 HES3Q5TGS1 186 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 ZNF544Q6NX49 715 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 CNIH2Q6PI25 160 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 SLC25A47Q6Q0C1 308 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 BAIAP2L2Q6UXY1 529 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 GDPD3Q7L5L3 318 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 LRRTM1Q86UE6 522 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 SLC22A16Q86VW1 577 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 CATSPERDQ86XM0 798 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 WDFY1Q8IWB7 410 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 TMEM123Q8N131 208 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 BEST3Q8N1M1 668 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 PRSS35Q8N3Z0 413 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 PRR18Q8N4B5 295 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 TMEM156Q8N614 296 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 YIPF7Q8N8F6 280 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 ZBTB34Q8NCN2 500 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 IL17RDQ8NFM7 739 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 OR1J4Q8NGS1 313 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 OR6N2Q8NGY6 317 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 OR5AK2Q8NH90 309 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 GPR148Q8TDV2 347 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 ADAMTS14Q8WXS8 1223 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 HSD17B8Q92506 261 aa4.91□□□□□ -1.62
ATG4A-208ENST00000489247 TMEM54Q969K7 222 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms