RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ATF6BQ99941 703 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 C1QTNF6Q9BXI9 259 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 BCO1Q9HAY6 547 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 HS3ST3A1Q9Y663 406 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 XRCC3O43542 346 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 H2AFB1P0C5Y9 115 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 DUSP1P28562 367 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 DCTDP32321 178 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 SNTB1Q13884 538 aaKnown RBP16.05■□□□□ 0.16
NPHP4-209ENST00000489180 ELAVL1Q15717 326 aaKnown RBP16.05■□□□□ 0.16
NPHP4-209ENST00000489180 SLC35G3Q8N808 338 aa16.05■□□□□ 0.16
NPHP4-209ENST00000489180 OR5H14A6NHG9 310 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 C15orf54Q8N8G6 183 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 PPP1R3CQ9UQK1 317 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 IFITM5A6NNB3 132 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 HNF1AP20823 631 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 NKG7Q16617 165 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 OR2B11Q5JQS5 317 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 STAC2Q6ZMT1 411 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 TMEM123Q8N131 208 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 CA13Q8N1Q1 262 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 OR51F2Q8NH61 342 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 BCL7CQ8WUZ0 217 aaPredicted RBP16.04■□□□□ 0.16
NPHP4-209ENST00000489180 PLA2G12AQ9BZM1 189 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 SLC6A13Q9NSD5 602 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 ST8SIA3O43173 380 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 OR2C1O95371 312 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 IGLV3-27P01718 113 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 IGHEP01854 428 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 UBE2IP63279 158 aaKnown RBP16.04■□□□□ 0.16
NPHP4-209ENST00000489180 ZFP62Q8NB50 900 aaPredicted RBP16.04■□□□□ 0.16
NPHP4-209ENST00000489180 TSLPQ969D9 159 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 LYSMD1Q96S90 227 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 SLC25A19Q9HC21 320 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 SAGE1Q9NXZ1 904 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 KCNG2Q9UJ96 466 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 CYB5BO43169 146 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 MLF1P58340 268 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 CDC20Q12834 499 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 SMIM19Q96E16 107 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 TINAGL1Q9GZM7 467 aaPredicted RBP16.04■□□□□ 0.16
NPHP4-209ENST00000489180 SPNS1Q9H2V7 528 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 PLEKHF2Q9H8W4 249 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 MED29Q9NX70 200 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 KPTNQ9Y664 436 aa16.04■□□□□ 0.16
NPHP4-209ENST00000489180 OR2F2O95006 317 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 APOA2P02652 100 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 TCN2P20062 427 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 OPRM1P35372 400 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 OR2F1Q13607 317 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 SIRT6Q8N6T7 355 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 SIT1Q9Y3P8 196 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 FLVCR1Q9Y5Y0 555 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 ZNF732B4DXR9 585 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 UMAD1C9J7I0 102 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 DFFBO76075 338 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 OR10J4P0C629 311 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 HRH1P35367 487 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 TBC1D28Q2M2D7 210 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 ACOT7LQ6ZUV0 252 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 BTLAQ7Z6A9 289 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 GCNT2Q8N0V5 402 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 SCCPDHQ8NBX0 429 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 SEH1LQ96EE3 360 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 SCPEP1Q9HB40 452 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 TARM1B6A8C7 271 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 HOXC11O43248 304 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-209ENST00000489180 SPINT2O43291 252 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 ST6GAL1P15907 406 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 HOXD11P31277 338 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-209ENST00000489180 FCGR2CP31995 323 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 RBP2P50120 134 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 CDK5R1Q15078 307 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.03■□□□□ 0.16
NPHP4-209ENST00000489180 CATSPERDQ86XM0 798 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 PLPP6Q8IY26 295 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 MED9Q9NWA0 146 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 EXO1Q9UQ84 846 aaKnown RBP16.03■□□□□ 0.16
NPHP4-209ENST00000489180 PRELID3BQ9Y3B1 194 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 PRRC2BQ5JSZ5 2229 aaKnown RBP16.03■□□□□ 0.16
NPHP4-209ENST00000489180 MN1Q10571 1320 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-209ENST00000489180 PLCH1Q4KWH8 1693 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 A0A087WV62 115 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 SSSCA1O60232 199 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 OR4E1P0C645 316 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 CD22P20273 847 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 C8orf44Q96CB5 159 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 ASB16Q96NS5 453 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 BARHL1Q9BZE3 327 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 GPR84Q9NQS5 396 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 FBXL4Q9UKA2 621 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 SLCO1B1Q9Y6L6 691 aa16.03■□□□□ 0.16
NPHP4-209ENST00000489180 CCL11P51671 97 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 ZNF92Q03936 586 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 DPTQ07507 201 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 H2BFWTQ7Z2G1 175 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 MFSD4AQ8N468 514 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 ARIH2OSQ8N7S6 290 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 CTSLP07711 333 aa16.02■□□□□ 0.16
NPHP4-209ENST00000489180 ACKR3P25106 362 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms