RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 DCTDP32321 178 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 OPRL1P41146 370 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 NR1H2P55055 460 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 OR12D2P58182 307 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 DOC2BQ14184 412 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 SPHARQ15513 63 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 HIKESHIQ53FT3 197 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 SYT6Q5T7P8 510 aaPredicted RBP13.99□□□□□ -0.17
CLDN11-208ENST00000488989 BHLHA15Q7RTS1 189 aaPredicted RBP13.99□□□□□ -0.17
CLDN11-208ENST00000488989 LILRB4Q8NHJ6 448 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 HAVCR2Q8TDQ0 301 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 SPRYD4Q8WW59 207 aaPredicted RBP13.99□□□□□ -0.17
CLDN11-208ENST00000488989 NANOS1Q8WY41 292 aaKnown RBP13.99□□□□□ -0.17
CLDN11-208ENST00000488989 C4orf36Q96KX1 117 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 USB1Q9BQ65 265 aaKnown RBP13.99□□□□□ -0.17
CLDN11-208ENST00000488989 OR2H1Q9GZK4 316 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 WNT5BQ9H1J7 359 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 ISG20L2Q9H9L3 353 aaKnown RBP13.99□□□□□ -0.17
CLDN11-208ENST00000488989 VCX3AQ9NNX9 186 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 GALNT8Q9NY28 637 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 SLCO1C1Q9NYB5 712 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 ATPIF1Q9UII2 106 aa13.99□□□□□ -0.17
CLDN11-208ENST00000488989 ERRFI1Q9UJM3 462 aaPredicted RBP13.99□□□□□ -0.17
CLDN11-208ENST00000488989 HCFC1P51610 2035 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 ZNF503-AS2A6NEH8 195 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 MAGEB4O15481 346 aaPredicted RBP13.98□□□□□ -0.17
CLDN11-208ENST00000488989 SGCEO43556 437 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 KRT8P05787 483 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 TACSTD2P09758 323 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 COX5BP10606 129 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 ARR3P36575 388 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 ASCL1P50553 236 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 PSG4Q00888 419 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 BDH1Q02338 343 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 MRPL28Q13084 256 aaKnown RBP13.98□□□□□ -0.17
CLDN11-208ENST00000488989 BLMHQ13867 455 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 RAB35Q15286 201 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 TP53I3Q53FA7 332 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 ELFN2Q5R3F8 820 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 LRRN1Q6UXK5 716 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 VASH1Q7L8A9 365 aaPredicted RBP13.98□□□□□ -0.17
CLDN11-208ENST00000488989 KRT77Q7Z794 578 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 WDR31Q8NA23 367 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 RORBQ92753 470 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 RNF166Q96A37 237 aaPredicted RBP13.98□□□□□ -0.17
CLDN11-208ENST00000488989 PELI1Q96FA3 418 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 COG8Q96MW5 612 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 ZNF75AQ96N20 296 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 COQ7Q99807 217 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 MROQ9BYG7 248 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 TTTY10Q9BZA0 68 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 HDHD2Q9H0R4 259 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 ELOVL3Q9HB03 270 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 BABAM2Q9NXR7 383 aa13.98□□□□□ -0.17
CLDN11-208ENST00000488989 OR6C6A6NF89 314 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 OR5H1A6NKK0 313 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 J3QLW9 94 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 SYNGR3O43761 229 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 INMTO95050 263 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 LALBAP00709 142 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 HLA-HP01893 362 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 PATE4P0C8F1 98 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 ZNF19P17023 458 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 AGAP20933 346 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 PAX7P23759 505 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 OTX1P32242 354 aaPredicted RBP13.97□□□□□ -0.17
CLDN11-208ENST00000488989 RPL5P46777 297 aaKnown RBP13.97□□□□□ -0.17
CLDN11-208ENST00000488989 RIDAP52758 137 aaKnown RBP13.97□□□□□ -0.17
CLDN11-208ENST00000488989 ECH1Q13011 328 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 MLLT11Q13015 90 aaPredicted RBP13.97□□□□□ -0.17
CLDN11-208ENST00000488989 MED22Q15528 200 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 TSC22D1Q15714 1073 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 NEDD8Q15843 81 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 KRTAP27-1Q3LI81 207 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 TIMM23BQ5SRD1 257 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 LIPNQ5VXI9 398 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 TMEM53Q6P2H8 277 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 P2RY8Q86VZ1 359 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 STEAP2Q8NFT2 490 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 RPS4Y2Q8TD47 263 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 GATAD2BQ8WXI9 593 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 NIPAL2Q9H841 368 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 NOX3Q9HBY0 568 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 PLEK2Q9NYT0 353 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 IKZF2Q9UKS7 526 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 SLC5A6Q9Y289 635 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 AMDHD2Q9Y303 409 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 LRP12Q9Y561 859 aa13.97□□□□□ -0.17
CLDN11-208ENST00000488989 PSMD9O00233 223 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 DOK2O60496 412 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 SRSF10O75494 262 aaKnown RBP13.96□□□□□ -0.17
CLDN11-208ENST00000488989 H2BFMP0C1H6 154 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 CRYGSP22914 178 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 IL32P24001 234 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 CCKARP32238 428 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 TGM4P49221 684 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 GP2P55259 537 aaKnown RBP13.96□□□□□ -0.17
CLDN11-208ENST00000488989 UBE2NP61088 152 aaKnown RBP13.96□□□□□ -0.17
CLDN11-208ENST00000488989 RAB1AP62820 205 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 GRB2P62993 217 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms