RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 FANK1Q8TC84 345 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 MARCH1Q8TCQ1 289 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 DTX3LQ8TDB6 740 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 HIST1H4GQ99525 98 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 RASL11BQ9BPW5 248 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 KLHDC3Q9BQ90 382 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 NIPSNAP3BQ9BS92 247 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 RAB34Q9BZG1 259 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 SELENOIQ9C0D9 397 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 AZI2Q9H6S1 392 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 PATZ1Q9HBE1 687 aaKnown RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 LY9Q9HBG7 655 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 CCNB1IP1Q9NPC3 277 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 CYTL1Q9NRR1 136 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 DDX19AQ9NUU7 478 aaKnown RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 IKZF2Q9UKS7 526 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 SLC22A14Q9Y267 594 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 POLDIP2Q9Y2S7 368 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 STARD10Q9Y365 291 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 RBMX2Q9Y388 322 aaKnown RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 CBY1Q9Y3M2 126 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 V9GY05 133 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 CFAP43Q8NDM7 1665 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 TOP2BQ02880 1626 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 ZNFX1Q9P2E3 1918 aaKnown RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 KDM5DQ9BY66 1539 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 LRRC9Q6ZRR7 1453 aa2.52□□□□□ -2.01
SSR1-209ENST00000488834 CHD2O14647 1828 aaKnown RBP2.52□□□□□ -2.01
SSR1-209ENST00000488834 NPHP4O75161 1426 aaPredicted RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 SETD1AO15047 1707 aaKnown RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 PNPLA6Q8IY17 1366 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 TTC21AQ8NDW8 1320 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 MYH9P35579 1960 aaKnown RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 HECW1Q76N89 1606 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 TRBV11-1A0A0K0K1C0 115 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 A0A1W2PPE3 182 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 PDZK1P1A8MUH7 402 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 SERPINE3A8MV23 424 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 F5H6K3 240 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 RAD51BO15315 384 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 RGS16O15492 202 aaPredicted RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 AQP9O43315 295 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 TRAPPC3O43617 180 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 CALUO43852 315 aaPredicted RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 CRTAPO75718 401 aaPredicted RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 OR2J3O76001 311 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 CLDN9O95484 217 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 GLAP06280 429 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 KLK3P07288 261 aaPredicted RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 COX5AP20674 150 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 CCNOP22674 350 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 MMP11P24347 488 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 STOMP27105 288 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 GTF2E2P29084 291 aaKnown RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 RRM2P31350 389 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 SHMT2P34897 504 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 VHLP40337 213 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 PPP1R2P41236 205 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 CRYBB2P43320 205 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 UQCRFS1P47985 274 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 EIF2B2P49770 351 aaKnown RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 GPM6AP51674 278 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 EFNB2P52799 333 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 RPL26P61254 145 aaKnown RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 SKP1P63208 163 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 OGDHQ02218 1023 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 RAD51Q06609 339 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 KLRC3Q07444 240 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 SCRN3Q0VDG4 424 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 C1orf61Q13536 156 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 NSUN5P1Q3KNT7 163 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 CCDC58Q4VC31 144 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 TTMPQ5BVD1 217 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 PPP1R2P3Q6NXS1 205 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 UTS2BQ765I0 119 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 ZNF429Q86V71 674 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 LIX1Q8N485 282 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 DNAAF3Q8N9W5 541 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 TMEM104Q8NE00 496 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 OR7G2Q8NG99 324 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 LHFPL5Q8TAF8 219 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 CACNG8Q8WXS5 425 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 FGF11Q92914 225 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 RPUSD4Q96CM3 377 aaKnown RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 RMND5BQ96G75 393 aaPredicted RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 TIMD4Q96H15 378 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 ZNF317Q96PQ6 595 aaPredicted RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 CLCC1Q96S66 551 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 FMO2Q99518 471 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 TMEM246Q9BRR3 403 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 NAT9Q9BTE0 207 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 HINT2Q9BX68 163 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 TM6SF2Q9BZW4 377 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 ILKAPQ9H0C8 392 aaPredicted RBP2.51□□□□□ -2.01
SSR1-209ENST00000488834 LHX5Q9H2C1 402 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 OR51B5Q9H339 312 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 RBKSQ9H477 322 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 LRRC19Q9H756 370 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 FOLH1BQ9HBA9 442 aa2.51□□□□□ -2.01
SSR1-209ENST00000488834 NT5MQ9NPB1 228 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms