RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SSX6Q7RTT6 188 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.07■□□□□ 0.32
CCM2-216ENST00000488727 PXKQ7Z7A4 578 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 TPRA1Q86W33 373 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 UEVLDQ8IX04 471 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 SLC35F2Q8IXU6 374 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 ZNF808Q8N4W9 903 aaPredicted RBP17.07■□□□□ 0.32
CCM2-216ENST00000488727 ASB5Q8WWX0 329 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 KCTD12Q96CX2 325 aaKnown RBP17.07■□□□□ 0.32
CCM2-216ENST00000488727 ZMYND19Q96E35 227 aaPredicted RBP17.07■□□□□ 0.32
CCM2-216ENST00000488727 NOSIPQ9Y314 301 aaKnown RBP17.07■□□□□ 0.32
CCM2-216ENST00000488727 ADAM18Q9Y3Q7 739 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 DOPEY1Q5JWR5 2465 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 TMCC2O75069 709 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 TXNDC12O95881 172 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 HLA-DQB1P01920 261 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 F13BP05160 661 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 CSF3P09919 207 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 SPI1P17947 270 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 AGAP20933 346 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 SLC25A1P53007 311 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 HSF2Q03933 536 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 WDFY1Q8IWB7 410 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 MS4A15Q8N5U1 240 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 LILRB4Q8NHJ6 448 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 CA5BP1Q8WTZ4 195 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 MRPL48Q96GC5 212 aaKnown RBP17.07■□□□□ 0.32
CCM2-216ENST00000488727 NDEL1Q9GZM8 345 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 OPN3Q9H1Y3 402 aaPredicted RBP17.07■□□□□ 0.32
CCM2-216ENST00000488727 PPP1R3EQ9H7J1 279 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 MED29Q9NX70 200 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 NPAP1Q9NZP6 1156 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 COMMD3Q9UBI1 195 aa17.07■□□□□ 0.32
CCM2-216ENST00000488727 SPTBN1Q01082 2364 aaKnown RBP17.07■□□□□ 0.32
CCM2-216ENST00000488727 FAM90A27PA6NNH2 459 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 NCR1O76036 304 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 CD14P08571 375 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 EVX1P49640 407 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 CLDN17P56750 224 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 CD300CQ08708 224 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 DBPQ10586 325 aaPredicted RBP17.06■□□□□ 0.32
CCM2-216ENST00000488727 CNIH2Q6PI25 160 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 FAM122BQ7Z309 247 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 IL17RDQ8NFM7 739 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 ABHD4Q8TB40 342 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 SSC4DQ8WTU2 575 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 HPS1Q92902 700 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 TMEM45BQ96B21 275 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 PLSCR4Q9NRQ2 329 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 JKAMPQ9P055 326 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 COL12A1Q99715 3063 aa17.06■□□□□ 0.32
CCM2-216ENST00000488727 OR6C68A6NDL8 312 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 EEF1E1-BLOC1S5C9J1V9 151 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 EEF1E1O43324 174 aaKnown RBP17.05■□□□□ 0.32
CCM2-216ENST00000488727 SSX4O60224 188 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 HPGDSO60760 199 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 GLCEO94923 617 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 MYL9P24844 172 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 RFX2P48378 723 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 ERVK-25P63136 954 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 ALG10Q5BKT4 473 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 PAMR1Q6UXH9 720 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 TFAP2EQ6VUC0 442 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 ZBTB8BQ8NAP8 495 aaPredicted RBP17.05■□□□□ 0.32
CCM2-216ENST00000488727 NMNAT3Q96T66 252 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 PROCRQ9UNN8 238 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 LRRK2Q5S007 2527 aa17.05■□□□□ 0.32
CCM2-216ENST00000488727 NKX2-6A6NCS4 301 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 MRPL33O75394 65 aaKnown RBP17.04■□□□□ 0.32
CCM2-216ENST00000488727 SERPINA3P01011 423 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 IFNGR1P15260 489 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 OR3A2P47893 321 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 SELENOPP49908 381 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 GBX2P52951 348 aaPredicted RBP17.04■□□□□ 0.32
CCM2-216ENST00000488727 SLC3A1Q07837 685 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 CDK5R1Q15078 307 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 PYDC2Q56P42 97 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 NRARPQ7Z6K4 114 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 LUZP2Q86TE4 346 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 NR2C2APQ86WQ0 139 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 RFLNBQ8N5W9 214 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 CELF2-AS1Q8N7Q2 184 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 ZNF610Q8N9Z0 462 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 RASD2Q96D21 266 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 SMIM19Q96E16 107 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 EMC6Q9BV81 110 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 PIGMQ9H3S5 423 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 INIPQ9NRY2 104 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 TEX13CA0A0J9YWL9 993 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 ZNF432O94892 652 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 CLDN14O95500 239 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 SDHAP31040 664 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 PYCR1P32322 319 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 EIF2B2P49770 351 aaKnown RBP17.04■□□□□ 0.32
CCM2-216ENST00000488727 MELKQ14680 651 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 SLC25A35Q3KQZ1 300 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 CCDC58Q4VC31 144 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 SLC35D2Q76EJ3 337 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 AAED1Q7RTV5 226 aa17.04■□□□□ 0.32
CCM2-216ENST00000488727 CEACAM19Q7Z692 300 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms