RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 CATSPERDQ86XM0 798 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 OR1J2Q8NGS2 313 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 STT3BQ8TCJ2 826 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 NUDCD2Q8WVJ2 157 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 SEH1LQ96EE3 360 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 C5orf34Q96MH7 638 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 DIABLOQ9NR28 239 aa11.33□□□□□ -0.6
CLIC4-202ENST00000488683 LOC100289279A0A1B0GTE1 492 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 C5orf63A6NC05 138 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 HSPB2A8KAH6 182 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 ZNF814B7Z6K7 855 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 SRSF10O75494 262 aaKnown RBP11.32□□□□□ -0.6
CLIC4-202ENST00000488683 OR2A4O95047 310 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 AHSA1O95433 338 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 IFNA7P01567 189 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 IL5P05113 134 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 CFPP27918 469 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 PRSS12P56730 875 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 RBMS2Q15434 407 aaKnown RBP11.32□□□□□ -0.6
CLIC4-202ENST00000488683 HSPB2Q16082 182 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 COX15Q7KZN9 410 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 GLRX5Q86SX6 157 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 GABRG1Q8N1C3 465 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 OR52N4Q8NGI2 321 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 OR2I1PQ8NGU4 316 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 ASB17Q8WXJ9 295 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 ZNF501Q96CX3 271 aaPredicted RBP11.32□□□□□ -0.6
CLIC4-202ENST00000488683 MED30Q96HR3 178 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 OR2A7Q96R45 310 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 SEC61A2Q9H9S3 476 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 APMAPQ9HDC9 416 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 OPN4Q9UHM6 478 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 KLK13Q9UKR3 277 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 MAB21L2Q9Y586 359 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 A0A1B0GX78 115 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 A0A1W2PP11 408 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 CELA2AP08217 269 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 GIPP09681 153 aaPredicted RBP11.32□□□□□ -0.6
CLIC4-202ENST00000488683 ACHEP22303 614 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 PRKXP51817 358 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 MAP2K6P52564 334 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 BIDP55957 195 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 SCAND1P57086 179 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 HLXQ14774 488 aaPredicted RBP11.32□□□□□ -0.6
CLIC4-202ENST00000488683 C3P1Q6ZMU1 363 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 ZNF574Q6ZN55 896 aaPredicted RBP11.32□□□□□ -0.6
CLIC4-202ENST00000488683 CHST4Q8NCG5 386 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 OR2AK2Q8NG84 335 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 OR52N5Q8NH56 324 aa11.32□□□□□ -0.6
CLIC4-202ENST00000488683 URB1O60287 2271 aaKnown RBP11.32□□□□□ -0.6
CLIC4-202ENST00000488683 SNRPGP15A8MWD9 76 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 G3V3Y1 287 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 IGHMP01871 453 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 LPLP06858 475 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 ACSM4P0C7M7 580 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 GIMD1P0DJR0 217 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 IGFBP3P17936 291 aaPredicted RBP11.31□□□□□ -0.6
CLIC4-202ENST00000488683 SFTPDP35247 375 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 SLC26A5P58743 744 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 DHODHQ02127 395 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 CLLU1Q5K131 121 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 PTCRAQ6ISU1 281 aaPredicted RBP11.31□□□□□ -0.6
CLIC4-202ENST00000488683 RHOUQ7L0Q8 258 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 CLEC1AQ8NC01 280 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 C15orf40Q8WUR7 153 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 SLC39A7Q92504 469 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 ADAT3Q96EY9 351 aaPredicted RBP11.31□□□□□ -0.6
CLIC4-202ENST00000488683 RADILQ96JH8 1075 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 SLC41A2Q96JW4 573 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 SLC6A7Q99884 636 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 NICN1Q9BSH3 213 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 CNTD2Q9H8S5 307 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 G6PC2Q9NQR9 355 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 PRMT8Q9NR22 394 aaPredicted RBP11.31□□□□□ -0.6
CLIC4-202ENST00000488683 FAM25EA8MYX2 175 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 NPIPA5E9PKD4 350 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 DCNP07585 359 aaKnown RBP11.31□□□□□ -0.6
CLIC4-202ENST00000488683 CSF1P09603 554 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 GNB3P16520 340 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 GLO1Q04760 184 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 PRAMEF20Q5VT98 475 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 TMUB2Q71RG4 321 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 PLXDC1Q8IUK5 500 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 APCDD1LQ8NCL9 501 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 OR13C9Q8NGT0 318 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 OR6N1Q8NGY5 312 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 GSX2Q9BZM3 304 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 GPN1Q9HCN4 374 aaPredicted RBP11.31□□□□□ -0.6
CLIC4-202ENST00000488683 OR52A1Q9UKL2 312 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 NPIPA1Q9UND3 350 aa11.31□□□□□ -0.6
CLIC4-202ENST00000488683 RPH3AQ9Y2J0 694 aaPredicted RBP11.31□□□□□ -0.6
CLIC4-202ENST00000488683 SPENQ96T58 3664 aaKnown RBP11.31□□□□□ -0.6
CLIC4-202ENST00000488683 NCOA6Q14686 2063 aaPredicted RBP11.3□□□□□ -0.6
CLIC4-202ENST00000488683 MBTPS2O43462 519 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 NUDT21O43809 227 aaKnown RBP11.3□□□□□ -0.6
CLIC4-202ENST00000488683 DUX1O43812 170 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 RAB3DO95716 219 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 AKAIN1P0CW23 69 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 ZNF823P16415 610 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 ABOP16442 354 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms