RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 DPPA2Q7Z7J5 298 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 TIGD4Q8IY51 512 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 DEPDC4Q8N2C3 294 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 OR6N2Q8NGY6 317 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 OR1F12Q8NHA8 337 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 TMEM163Q8TC26 289 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 TMEM171Q8WVE6 324 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 SYT3Q9BQG1 590 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 TTTY10Q9BZA0 68 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 NAV2Q8IVL1 2488 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 PLCE1Q9P212 2302 aa14.77□□□□□ -0.05
SHROOM1-205ENST00000488072 AKAP9Q99996 3911 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 PRR32B1ATL7 298 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 CLIC3O95833 236 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 DNASE1P24855 282 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 ENTPD1P49961 510 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 PRSS12P56730 875 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 TBC1D28Q2M2D7 210 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 ALKBH6Q3KRA9 238 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 ELFN2Q5R3F8 820 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 C1QTNF12Q5T7M4 302 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 C11orf71Q6IPW1 123 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 DCXRQ7Z4W1 244 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 SYT9Q86SS6 491 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 ZCCHC24Q8N2G6 241 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 MUC15Q8N387 334 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 RFLNBQ8N5W9 214 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 OR4F15Q8NGB8 312 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 FAM81AQ8TBF8 368 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 GTF3AQ92664 365 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 PITX2Q99697 317 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 CDADC1Q9BWV3 514 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 MRPL37Q9BZE1 423 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 GRIP1Q9Y3R0 1128 aa14.76□□□□□ -0.05
SHROOM1-205ENST00000488072 SMPD2O60906 423 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 PAICSP22234 425 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 APOBEC3AP31941 199 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 MPV17P39210 176 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 MAD2L1BPQ15013 274 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 RAB35Q15286 201 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 DEFB113Q30KQ7 82 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 OGFRL1Q5TC84 451 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 C20orf204Q6ZNR8 217 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 SHFQ7M4L6 423 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 NUP37Q8NFH4 326 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 GJC3Q8NFK1 279 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 ABHD4Q8TB40 342 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 PERPQ96FX8 193 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 INTS14Q96SY0 518 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 TEAD3Q99594 435 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 MARCH7Q9H992 704 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 FAM118AQ9NWS6 357 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 COPS3Q9UNS2 423 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 USF3Q68DE3 2245 aa14.75□□□□□ -0.05
SHROOM1-205ENST00000488072 MAGEB4O15481 346 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 LY6HO94772 140 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 LCKP06239 509 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 PAX7P23759 505 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 RAD23AP54725 363 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 UCP2P55851 309 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 GALK2Q01415 458 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 HNRNPA0Q13151 305 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 EIF2B1Q14232 305 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 PCK2Q16822 640 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 SWI5Q1ZZU3 235 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 DTX2Q86UW9 622 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 ALDH16A1Q8IZ83 802 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 FBXL14Q8N1E6 418 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 IL17RDQ8NFM7 739 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 OR1J1Q8NGS3 322 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 OR2AJ1Q8NGZ0 328 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 SLC25A40Q8TBP6 338 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 ST7LQ8TDW4 575 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 HRASLS5Q96KN8 279 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 C4orf45Q96LM5 186 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 ZNF582Q96NG8 517 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 CACNG6Q9BXT2 260 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 CENPMQ9NSP4 180 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 NDRG4Q9ULP0 352 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 STARD10Q9Y365 291 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 ORC6Q9Y5N6 252 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 DSCAMO60469 2012 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 CCDC168Q8NDH2 2452 aa14.74□□□□□ -0.05
SHROOM1-205ENST00000488072 TEX15Q9BXT5 2789 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 F5H5K5 113 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 OVOL3O00110 214 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 PSMD9O00233 223 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 CASQ2O14958 399 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 GLRXP35754 106 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 SERPINF1P36955 418 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 RBMXP38159 391 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 ART1P52961 327 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 KRTAP27-1Q3LI81 207 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 MEPCEQ7L2J0 689 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 KRTAP1-3Q8IUG1 177 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 OR1J2Q8NGS2 313 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 SLAMF6Q96DU3 332 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 ABHD6Q9BV23 337 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 TEX12Q9BXU0 123 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 OR2J1Q9GZK6 312 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms