RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 MTPNP58546 118 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 TOP3AQ13472 1001 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-228ENST00000487354 FHL1Q13642 323 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 TAF9Q16594 264 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 SLC27A4Q6P1M0 643 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 LYPD2Q6UXB3 125 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 ALDH16A1Q8IZ83 802 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 SLC7A6Q92536 515 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 TBX15Q96SF7 602 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 EMC7Q9NPA0 242 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 POLE4Q9NR33 117 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 MIOXQ9UGB7 285 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 NDRG4Q9ULP0 352 aaKnown RBP12.76□□□□□ -0.37
MCF2L-228ENST00000487354 HIF3AQ9Y2N7 669 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 POMT1Q9Y6A1 747 aa12.76□□□□□ -0.37
MCF2L-228ENST00000487354 IGHV3-64DA0A0J9YX35 117 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 GMNCA6NCL1 334 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 EVPLLA8MZ36 301 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 CRYBA1P05813 215 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 TNFRSF1BP20333 461 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 MSR1P21757 451 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 CFHR2P36980 270 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 PITPNBP48739 271 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 GZMMP51124 257 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 STX1BP61266 288 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 PCBD1P61457 104 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 HOXA4Q00056 320 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-228ENST00000487354 HLXQ14774 488 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-228ENST00000487354 BEAN1Q3B7T3 259 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 WDR25Q64LD2 544 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-228ENST00000487354 VASH1Q7L8A9 365 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-228ENST00000487354 SYT9Q86SS6 491 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 IGFN1Q86VF2 1251 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 OR5AS1Q8N127 324 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 UBE2FQ969M7 185 aa12.75□□□□□ -0.37
MCF2L-228ENST00000487354 CENPVL3A0A0U1RRI6 287 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 A0A1B0GWJ7 208 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 A0A1W2PPL8 197 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 IFNL4K9M1U5 179 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 SURF4O15260 269 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 GPR137BO60478 399 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 DOK2O60496 412 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 TUBG1P23258 451 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 HTR5AP47898 357 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 IDH3AP50213 366 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 BPIFB3P59826 476 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 RPL15P61313 204 aaKnown RBP12.74□□□□□ -0.37
MCF2L-228ENST00000487354 RPL27P61353 136 aaKnown RBP12.74□□□□□ -0.37
MCF2L-228ENST00000487354 CYP51A1Q16850 503 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 ZNF181Q2M3W8 571 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 ALG10Q5BKT4 473 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 GPR157Q5UAW9 335 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 ZNF620Q6ZNG0 422 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 MOGAT3Q86VF5 341 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 OR8B3Q8NGG8 313 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 TMEM239Q8WW34 195 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 DYRK2Q92630 601 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 OR8B2Q96RD0 313 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 KAT8Q9H7Z6 458 aaKnown RBP12.74□□□□□ -0.37
MCF2L-228ENST00000487354 TUBG2Q9NRH3 451 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 ASH2LQ9UBL3 628 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 CTSZQ9UBR2 303 aa12.74□□□□□ -0.37
MCF2L-228ENST00000487354 OR6C6A6NF89 314 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 H7C1C5 153 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 PHYHO14832 338 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 SHOX2O60902 331 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-228ENST00000487354 FCN3O75636 299 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 IGHV4-59P01825 116 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 NR2C1P13056 603 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 RAC2P15153 192 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 PSMB10P40306 273 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 SLC18A1P54219 525 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 LCN6P62502 163 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 GUCY1A3Q02108 690 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 PIN1Q13526 163 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-228ENST00000487354 PDCD1Q15116 288 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 AGKQ53H12 422 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 KPRPQ5T749 579 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-228ENST00000487354 OTPQ5XKR4 325 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 ARL9Q6T311 187 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 FBXW12Q6X9E4 464 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 Q6ZPA2 131 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 Q6ZSV7 163 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 DHDDSQ86SQ9 333 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 PATL1Q86TB9 770 aaKnown RBP12.73□□□□□ -0.37
MCF2L-228ENST00000487354 LRRC8CQ8TDW0 803 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 SSMEM1Q8WWF3 244 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 PLEKHA8Q96JA3 519 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 FAM71F1Q96KD3 344 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-228ENST00000487354 CLN8Q9UBY8 286 aa12.73□□□□□ -0.37
MCF2L-228ENST00000487354 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.73□□□□□ -0.37
MCF2L-228ENST00000487354 V9GYY5 206 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-228ENST00000487354 C12orf71A8MTZ7 269 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 F5H5P2 479 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 G3V4G9 280 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 POLR3GO15318 223 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-228ENST00000487354 OR5F1O95221 314 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 OR2T2Q6IF00 324 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 CCDC80Q76M96 950 aa12.72□□□□□ -0.37
MCF2L-228ENST00000487354 LDLRAD3Q86YD5 345 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms