RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 PTP4A1Q93096 173 aa13.55□□□□□ -0.24
SRRT-212ENST00000487311 DACT3Q96B18 629 aaPredicted RBP13.55□□□□□ -0.24
SRRT-212ENST00000487311 TPD52L3Q96J77 140 aa13.55□□□□□ -0.24
SRRT-212ENST00000487311 ATP6V1G3Q96LB4 118 aa13.55□□□□□ -0.24
SRRT-212ENST00000487311 ZMAT3Q9HA38 289 aaKnown RBP13.55□□□□□ -0.24
SRRT-212ENST00000487311 GMPR2Q9P2T1 348 aaKnown RBP13.55□□□□□ -0.24
SRRT-212ENST00000487311 ADAM18Q9Y3Q7 739 aa13.55□□□□□ -0.24
SRRT-212ENST00000487311 TGP01266 2768 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 A6NIZ1 184 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 SGCEO43556 437 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 PLATP00750 562 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 VIMP08670 466 aaKnown RBP13.54□□□□□ -0.24
SRRT-212ENST00000487311 PMELP40967 661 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 RAP1BP61224 184 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 RAP1AP62834 184 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 SELENOWP63302 87 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 PRKCDQ05655 676 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 LRRC23Q53EV4 343 aaPredicted RBP13.54□□□□□ -0.24
SRRT-212ENST00000487311 CCDC92Q53HC0 331 aaPredicted RBP13.54□□□□□ -0.24
SRRT-212ENST00000487311 C16orf87Q6PH81 154 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 C9orf139Q6ZV77 190 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 OAFQ86UD1 273 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 POU5F2Q8N7G0 328 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 ATG16L2Q8NAA4 619 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 NPEPL1Q8NDH3 523 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 OR8J3Q8NGG0 315 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 TMIGD2Q96BF3 282 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 UPRTQ96BW1 309 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 Q96M85 177 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 SSBP3Q9BWW4 388 aaPredicted RBP13.54□□□□□ -0.24
SRRT-212ENST00000487311 SLITRK2Q9H156 845 aa13.54□□□□□ -0.24
SRRT-212ENST00000487311 INTS9Q9NV88 658 aaKnown RBP13.54□□□□□ -0.24
SRRT-212ENST00000487311 DOCK11Q5JSL3 2073 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 A0A0G2JND7 137 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 CDC42EP2O14613 210 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 CTLA4P16410 223 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 SELEP16581 610 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 TUBG1P23258 451 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 MESTQ5EB52 335 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 FAM205BPQ63HN1 556 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 OR2T2Q6IF00 324 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 VTCN1Q7Z7D3 282 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 KLBQ86Z14 1044 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 OR10AD1Q8NGE0 317 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 RAB40AQ8WXH6 277 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 MEGF10Q96KG7 1140 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 PRRC1Q96M27 445 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 MAGEB18Q96M61 343 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 SH3GL1Q99961 368 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 TMEM246Q9BRR3 403 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 TUBG2Q9NRH3 451 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 OR5V1Q9UGF6 321 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 LRCH1Q9Y2L9 728 aa13.53□□□□□ -0.24
SRRT-212ENST00000487311 PRKDCP78527 4128 aaKnown RBP13.52□□□□□ -0.24
SRRT-212ENST00000487311 A0A087WUU8 490 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 IGHV2-70DA0A0C4DH43 119 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 OR6C6A6NF89 314 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 EFCAB9A8MZ26 197 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 HOXA3O43365 443 aaPredicted RBP13.52□□□□□ -0.25
SRRT-212ENST00000487311 EDF1O60869 148 aaKnown RBP13.52□□□□□ -0.25
SRRT-212ENST00000487311 IFNA14P01570 189 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 PPIAL4GP0DN37 164 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 RAC2P15153 192 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 MTNR1AP48039 350 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 GUCY1A3Q02108 690 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 SCRN3Q0VDG4 424 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 DEFB112Q30KQ8 113 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 MIDNQ504T8 468 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 METTL21CQ5VZV1 264 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 SLC27A4Q6P1M0 643 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 ERICH5Q6P6B1 374 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 BRD3OSQ6XYD6 125 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 FAM122BQ7Z309 247 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 WACQ9BTA9 647 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 PTTG3PQ9NZH4 202 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 PDP1Q9P0J1 537 aaPredicted RBP13.52□□□□□ -0.25
SRRT-212ENST00000487311 GRHPRQ9UBQ7 328 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 IL20RAQ9UHF4 553 aa13.52□□□□□ -0.25
SRRT-212ENST00000487311 COA3Q9Y2R0 106 aaPredicted RBP13.52□□□□□ -0.25
SRRT-212ENST00000487311 TRAV40A0A0B4J280 105 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 TEX13CA0A0J9YWL9 993 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 KIR2DS1A0A191URI9 304 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 PRSS37A4D1T9 235 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 HTR3EA5X5Y0 456 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 MRASO14807 208 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 RER1O15258 196 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 SURF4O15260 269 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 MLNRO43193 412 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 CD14P08571 375 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 GPR4P46093 362 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 SLC9A3P48764 834 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 GNB2P62879 340 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 HOXA4Q00056 320 aaPredicted RBP13.51□□□□□ -0.25
SRRT-212ENST00000487311 DBPQ10586 325 aaPredicted RBP13.51□□□□□ -0.25
SRRT-212ENST00000487311 RSPO1Q2MKA7 263 aaPredicted RBP13.51□□□□□ -0.25
SRRT-212ENST00000487311 LYPD2Q6UXB3 125 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 LRRN1Q6UXK5 716 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 SPATC1Q76KD6 591 aa13.51□□□□□ -0.25
SRRT-212ENST00000487311 MUC20Q8N307 709 aaPredicted RBP13.51□□□□□ -0.25
SRRT-212ENST00000487311 KIR3DL3Q8N743 410 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms