RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PTCHD4Q6ZW05 846 aa20.76■□□□□ 0.91
LIME1-206ENST00000487026 GLB1L2Q8IW92 636 aa20.76■□□□□ 0.91
LIME1-206ENST00000487026 SEMA6DQ8NFY4 1073 aa20.76■□□□□ 0.91
LIME1-206ENST00000487026 OR2Z1Q8NG97 314 aa20.76■□□□□ 0.91
LIME1-206ENST00000487026 OR4M2Q8NGB6 313 aa20.76■□□□□ 0.91
LIME1-206ENST00000487026 CMTM5Q96DZ9 223 aa20.76■□□□□ 0.91
LIME1-206ENST00000487026 GPA33Q99795 319 aa20.76■□□□□ 0.91
LIME1-206ENST00000487026 NUAK2Q9H093 628 aa20.76■□□□□ 0.91
LIME1-206ENST00000487026 MED4Q9NPJ6 270 aa20.76■□□□□ 0.91
LIME1-206ENST00000487026 DCAF13Q9NV06 445 aaKnown RBP20.76■□□□□ 0.91
LIME1-206ENST00000487026 ADA2Q9NZK5 511 aa20.76■□□□□ 0.91
LIME1-206ENST00000487026 VSX1Q9NZR4 365 aaPredicted RBP20.76■□□□□ 0.91
LIME1-206ENST00000487026 A0A0A6YYJ9 748 aa20.75■□□□□ 0.91
LIME1-206ENST00000487026 UNC119BA6NIH7 251 aa20.75■□□□□ 0.91
LIME1-206ENST00000487026 SBK2P0C263 348 aa20.75■□□□□ 0.91
LIME1-206ENST00000487026 EPHA1P21709 976 aa20.75■□□□□ 0.91
LIME1-206ENST00000487026 CDKN2AP42771 156 aaKnown RBP20.75■□□□□ 0.91
LIME1-206ENST00000487026 ERFP50548 548 aa20.75■□□□□ 0.91
LIME1-206ENST00000487026 DBPQ10586 325 aaPredicted RBP20.75■□□□□ 0.91
LIME1-206ENST00000487026 AQP6Q13520 282 aa20.75■□□□□ 0.91
LIME1-206ENST00000487026 CCDC92Q53HC0 331 aaPredicted RBP20.75■□□□□ 0.91
LIME1-206ENST00000487026 GPR139Q6DWJ6 353 aa20.75■□□□□ 0.91
LIME1-206ENST00000487026 ZER1Q7Z7L7 766 aa20.75■□□□□ 0.91
LIME1-206ENST00000487026 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.75■□□□□ 0.91
LIME1-206ENST00000487026 PEG10Q86TG7 708 aaKnown RBP20.75■□□□□ 0.91
LIME1-206ENST00000487026 NPEPL1Q8NDH3 523 aa20.75■□□□□ 0.91
LIME1-206ENST00000487026 ZNF418Q8TF45 676 aaPredicted RBP20.75■□□□□ 0.91
LIME1-206ENST00000487026 AURKCQ9UQB9 309 aa20.75■□□□□ 0.91
LIME1-206ENST00000487026 NPTNQ9Y639 398 aa20.75■□□□□ 0.91
LIME1-206ENST00000487026 V9GYQ6 96 aa20.75■□□□□ 0.91
LIME1-206ENST00000487026 RER1O15258 196 aa20.74■□□□□ 0.91
LIME1-206ENST00000487026 DBHP09172 617 aa20.74■□□□□ 0.91
LIME1-206ENST00000487026 KITLGP21583 273 aa20.74■□□□□ 0.91
LIME1-206ENST00000487026 CENPAP49450 140 aa20.74■□□□□ 0.91
LIME1-206ENST00000487026 SCGB2A2Q13296 93 aa20.74■□□□□ 0.91
LIME1-206ENST00000487026 OR1F12Q8NHA8 337 aa20.74■□□□□ 0.91
LIME1-206ENST00000487026 TSSK2Q96PF2 358 aa20.74■□□□□ 0.91
LIME1-206ENST00000487026 GPX7Q96SL4 187 aaPredicted RBP20.74■□□□□ 0.91
LIME1-206ENST00000487026 SPAG4Q9NPE6 437 aa20.74■□□□□ 0.91
LIME1-206ENST00000487026 PCDHB10Q9UN67 800 aa20.74■□□□□ 0.91
LIME1-206ENST00000487026 TENM1Q9UKZ4 2725 aa20.74■□□□□ 0.91
LIME1-206ENST00000487026 OR6C6A6NF89 314 aa20.73■□□□□ 0.91
LIME1-206ENST00000487026 ZFP36P26651 326 aaKnown RBP20.73■□□□□ 0.91
LIME1-206ENST00000487026 LSM6P62312 80 aaKnown RBP20.73■□□□□ 0.91
LIME1-206ENST00000487026 MEP1BQ16820 701 aa20.73■□□□□ 0.91
LIME1-206ENST00000487026 DPY19L2P2Q6ZN68 376 aa20.73■□□□□ 0.91
LIME1-206ENST00000487026 C1QL2Q7Z5L3 287 aa20.73■□□□□ 0.91
LIME1-206ENST00000487026 HAVCR1Q96D42 359 aa20.73■□□□□ 0.91
LIME1-206ENST00000487026 FUZQ9BT04 418 aa20.73■□□□□ 0.91
LIME1-206ENST00000487026 FAM107BQ9H098 131 aa20.73■□□□□ 0.91
LIME1-206ENST00000487026 C7orf69Q9H7B7 122 aa20.73■□□□□ 0.91
LIME1-206ENST00000487026 TMEM106BQ9NUM4 274 aa20.73■□□□□ 0.91
LIME1-206ENST00000487026 SAMD4AQ9UPU9 718 aaKnown RBP20.73■□□□□ 0.91
LIME1-206ENST00000487026 DYSFO75923 2080 aa20.73■□□□□ 0.91
LIME1-206ENST00000487026 TANC2Q9HCD6 1990 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 DCTN6O00399 190 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 GMNNO75496 209 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 PPP1R3DO95685 299 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 IGHV2-70P01814 119 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 TUBG1P23258 451 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 TNFSF4P23510 183 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 HLXQ14774 488 aaPredicted RBP20.72■□□□□ 0.91
LIME1-206ENST00000487026 KRT72Q14CN4 511 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 C12orf54Q6X4T0 127 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 OR5AS1Q8N127 324 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 ST7LQ8TDW4 575 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 ITLN1Q8WWA0 313 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 PTP4A1Q93096 173 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 TUBG2Q9NRH3 451 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 PTTG3PQ9NZH4 202 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 OPN4Q9UHM6 478 aa20.72■□□□□ 0.91
LIME1-206ENST00000487026 J3QLI3 93 aa20.71■□□□□ 0.91
LIME1-206ENST00000487026 TXNDC12O95881 172 aa20.71■□□□□ 0.91
LIME1-206ENST00000487026 MSX2P35548 267 aaPredicted RBP20.71■□□□□ 0.91
LIME1-206ENST00000487026 RPS6KA3P51812 740 aa20.71■□□□□ 0.91
LIME1-206ENST00000487026 SMARCD3Q6STE5 483 aa20.71■□□□□ 0.91
LIME1-206ENST00000487026 ADCK1Q86TW2 530 aa20.71■□□□□ 0.91
LIME1-206ENST00000487026 TEX29Q8N6K0 151 aa20.71■□□□□ 0.91
LIME1-206ENST00000487026 DHRS1Q96LJ7 313 aa20.71■□□□□ 0.91
LIME1-206ENST00000487026 SAMD8Q96LT4 415 aa20.71■□□□□ 0.91
LIME1-206ENST00000487026 ERMAPQ96PL5 475 aaPredicted RBP20.71■□□□□ 0.91
LIME1-206ENST00000487026 SRA1Q9HD15 236 aaKnown RBP20.71■□□□□ 0.91
LIME1-206ENST00000487026 POLR1DQ9Y2S0 133 aa20.71■□□□□ 0.91
LIME1-206ENST00000487026 TNFRSF1AP19438 455 aa20.7■□□□□ 0.9
LIME1-206ENST00000487026 PRDX6P30041 224 aa20.7■□□□□ 0.9
LIME1-206ENST00000487026 HILS1P60008 231 aa20.7■□□□□ 0.9
LIME1-206ENST00000487026 KCNMB1Q16558 191 aa20.7■□□□□ 0.9
LIME1-206ENST00000487026 CORO6Q6QEF8 472 aa20.7■□□□□ 0.9
LIME1-206ENST00000487026 NANPQ8TBE9 248 aa20.7■□□□□ 0.9
LIME1-206ENST00000487026 ZFAND2BQ8WV99 257 aa20.7■□□□□ 0.9
LIME1-206ENST00000487026 SLC6A7Q99884 636 aa20.7■□□□□ 0.9
LIME1-206ENST00000487026 KRCC1Q9NPI7 259 aaPredicted RBP20.7■□□□□ 0.9
LIME1-206ENST00000487026 LHFPL6Q9Y693 200 aa20.7■□□□□ 0.9
LIME1-206ENST00000487026 OR2T2Q6IF00 324 aa20.69■□□□□ 0.9
LIME1-206ENST00000487026 ZNF283Q8N7M2 679 aa20.69■□□□□ 0.9
LIME1-206ENST00000487026 ATG16L2Q8NAA4 619 aa20.69■□□□□ 0.9
LIME1-206ENST00000487026 C22orf15Q8WYQ4 148 aa20.69■□□□□ 0.9
LIME1-206ENST00000487026 PYURFQ96I23 114 aa20.69■□□□□ 0.9
LIME1-206ENST00000487026 COG8Q96MW5 612 aa20.69■□□□□ 0.9
LIME1-206ENST00000487026 OR2V2Q96R30 315 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms