RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 MS4A5Q9H3V2 200 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 ELOVL3Q9HB03 270 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 MRPL22Q9NWU5 206 aaKnown RBP15.62■□□□□ 0.09
COL1A1-207ENST00000486572 KCNG2Q9UJ96 466 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 SMAD7O15105 426 aaKnown RBP15.61■□□□□ 0.09
COL1A1-207ENST00000486572 ABHD16AO95870 558 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 ALDH3B1P43353 468 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 GINS1Q14691 196 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 MAD2L1BPQ15013 274 aaPredicted RBP15.61■□□□□ 0.09
COL1A1-207ENST00000486572 NKPD1Q17RQ9 610 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 ELFN2Q5R3F8 820 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 SLC18B1Q6NT16 456 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 CORO6Q6QEF8 472 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 HIPK1Q86Z02 1210 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 LINC00346Q8IVM7 164 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 ZCCHC24Q8N2G6 241 aaKnown RBP15.61■□□□□ 0.09
COL1A1-207ENST00000486572 OR51L1Q8NGJ5 315 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 OR2AJ1Q8NGZ0 328 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 NEU4Q8WWR8 484 aaPredicted RBP15.61■□□□□ 0.09
COL1A1-207ENST00000486572 FAM168AQ92567 244 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 CDADC1Q9BWV3 514 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 MYOZ1Q9NP98 299 aaPredicted RBP15.61■□□□□ 0.09
COL1A1-207ENST00000486572 PAPOLBQ9NRJ5 636 aaKnown RBP15.61■□□□□ 0.09
COL1A1-207ENST00000486572 CYB5R1Q9UHQ9 305 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 GPR160Q9UJ42 338 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 ZNF469Q96JG9 3925 aaPredicted RBP15.61■□□□□ 0.09
COL1A1-207ENST00000486572 MTORP42345 2549 aa15.61■□□□□ 0.09
COL1A1-207ENST00000486572 IGHV4-30-2A0A087WSY4 118 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 RNF223E7ERA6 249 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 G3V2T6 193 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 CLPTM1O96005 669 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 NGFP01138 241 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 GYPBP06028 91 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 ZNF823P16415 610 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 SPI1P17947 270 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 GCH1P30793 250 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 GGT2P36268 569 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 ACTR3P61158 418 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 PPP1CBP62140 327 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 ZNF718Q3SXZ3 478 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 SPATA46Q5T0L3 261 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 ZDHHC13Q8IUH4 622 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 PARP8Q8N3A8 854 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 SLC25A40Q8TBP6 338 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 ZNRF4Q8WWF5 429 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 LRTOMTQ8WZ04 291 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 SLC7A6Q92536 515 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 MARS2Q96GW9 593 aaKnown RBP15.6■□□□□ 0.09
COL1A1-207ENST00000486572 COQ7Q99807 217 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 REG4Q9BYZ8 158 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 TPK1Q9H3S4 243 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 TBCCD1Q9NVR7 557 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 SLCO1C1Q9NYB5 712 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 TAAR3PQ9P1P4 343 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 COMMD3-BMI1R4GMX3 469 aa15.6■□□□□ 0.09
COL1A1-207ENST00000486572 TVP23AA6NH52 213 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 FAM183AA6NL82 134 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 H3BSA7 217 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 CLUP10909 449 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 ZNF23P17027 643 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 PAICSP22234 425 aaKnown RBP15.59■□□□□ 0.09
COL1A1-207ENST00000486572 FMO3P31513 532 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 DAPP51397 102 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 BLVRAP53004 296 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 CDK5Q00535 292 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 KPNB1Q14974 876 aaKnown RBP15.59■□□□□ 0.09
COL1A1-207ENST00000486572 MBNL2Q5VZF2 373 aaKnown RBP15.59■□□□□ 0.09
COL1A1-207ENST00000486572 ACSM5Q6NUN0 579 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 LYPD4Q6UWN0 246 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 CFAP77Q6ZQR2 320 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 AMIGO2Q86SJ2 522 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 OR6K6Q8NGW6 343 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 KLF14Q8TD94 323 aaPredicted RBP15.59■□□□□ 0.09
COL1A1-207ENST00000486572 C10orf105Q8TEF2 133 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 SNX33Q8WV41 574 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 DCLRE1CQ96SD1 692 aaKnown RBP15.59■□□□□ 0.09
COL1A1-207ENST00000486572 SMR3AQ99954 134 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 TEX12Q9BXU0 123 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 OR2J1Q9GZK6 312 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 GABARAPL1Q9H0R8 117 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 SLC25A19Q9HC21 320 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 GRIP1Q9Y3R0 1128 aa15.59■□□□□ 0.09
COL1A1-207ENST00000486572 RTTNQ86VV8 2226 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 J3QW42 95 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 SURF4O15260 269 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 IGHV3-13P01766 116 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 HMGN1P05114 100 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 DBHP09172 617 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 NAT2P11245 290 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 SLC25A16P16260 332 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 TUBG1P23258 451 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 MPV17P39210 176 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 RGS6P49758 472 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 PDLIM4P50479 330 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 MOGQ16653 247 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 ALKBH6Q3KRA9 238 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 IPCEF1Q8WWN9 437 aaPredicted RBP15.58■□□□□ 0.08
COL1A1-207ENST00000486572 PYDC1Q8WXC3 89 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 OTULINQ96BN8 352 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 COG8Q96MW5 612 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms