RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 HSD17B8Q92506 261 aa12.9□□□□□ -0.34
POLR2J3-204ENST00000486319 C4orf45Q96LM5 186 aa12.9□□□□□ -0.34
POLR2J3-204ENST00000486319 OR14A2Q96R54 314 aa12.9□□□□□ -0.34
POLR2J3-204ENST00000486319 PPIL3Q9H2H8 161 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-204ENST00000486319 C1orf198Q9H425 327 aa12.9□□□□□ -0.34
POLR2J3-204ENST00000486319 CYB5R1Q9UHQ9 305 aa12.9□□□□□ -0.34
POLR2J3-204ENST00000486319 LRP12Q9Y561 859 aa12.9□□□□□ -0.34
POLR2J3-204ENST00000486319 FLVCR1Q9Y5Y0 555 aa12.9□□□□□ -0.34
POLR2J3-204ENST00000486319 OR4C45A6NMZ5 311 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 WISP2O76076 250 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 ACTL6AO96019 429 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 ZNF708P17019 499 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 TNFSF8P32971 234 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 CAV3P56539 151 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 CLDN18P56856 261 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 Q499Y3 187 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 HSD17B12Q53GQ0 312 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 FAM27D1Q5T7N8 215 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 OR7E24Q6IFN5 339 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 FCRLAQ7L513 359 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 LINC00346Q8IVM7 164 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 ZNF676Q8N7Q3 588 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 OR2AJ1Q8NGZ0 328 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 RNF133Q8WVZ7 376 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 ABTB1Q969K4 478 aaPredicted RBP12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 SLC30A2Q9BRI3 323 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 SLC6A15Q9H2J7 730 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 SLC5A6Q9Y289 635 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 POLR1DQ9Y2S0 133 aa12.89□□□□□ -0.35
POLR2J3-204ENST00000486319 SMIM30A4D0T7 59 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 LOC110117498-PIK3R3F6TDL0 507 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 SLC43A1O75387 559 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 NCR1O76036 304 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 H2BFMP0C1H6 154 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 RAB3BP20337 219 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 DCTDP32321 178 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 ZNF84P51523 738 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 PPP3R1P63098 170 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 RBPJQ06330 500 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 WDR38Q5JTN6 314 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 RNFT1Q5M7Z0 435 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 SPATC1Q76KD6 591 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 RHOUQ7L0Q8 258 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 C20orf196Q8IYI0 205 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 PARP16Q8N5Y8 322 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 GPR148Q8TDV2 347 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 ROBO4Q8WZ75 1007 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 KCTD12Q96CX2 325 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 SLAMF6Q96DU3 332 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 GPR137Q96N19 417 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 ATF6BQ99941 703 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 POLE4Q9NR33 117 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 FOXD3Q9UJU5 478 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 R4GMQ9 66 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 SVILO95425 2214 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 POLEQ07864 2286 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 TRBV5-5A0A0J9YX44 114 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 GPR171O14626 319 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 PDCD5O14737 125 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 TFECO14948 347 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 DHHO43323 396 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 SYNGR4O95473 234 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 OCM2P0CE71 109 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 SELENOPP49908 381 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 LSM6P62312 80 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 FOXL2NBQ6ZUU3 175 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 AAED1Q7RTV5 226 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 BTLAQ7Z6A9 289 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 CATSPERDQ86XM0 798 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 SIAH3Q8IW03 269 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 LAX1Q8IWV1 398 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 PRSS35Q8N3Z0 413 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 RGP1Q92546 391 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 ZNF845Q96IR2 970 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 ULBP2Q9BZM5 246 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 NELFAQ9H3P2 528 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 ABCB9Q9NP78 766 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 NOX4Q9NPH5 578 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 ERRFI1Q9UJM3 462 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 MCTS1Q9ULC4 181 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 UGT2A1Q9Y4X1 527 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 LHFPL6Q9Y693 200 aa12.88□□□□□ -0.35
POLR2J3-204ENST00000486319 DNAJC13O75165 2243 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 A0A1B0GTH9 108 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 A0A1W2PPK0 400 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 PNPP00491 289 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 RAF1P04049 648 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 SRMP19623 302 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 MSR1P21757 451 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 CDAP32320 146 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 KIR3DL2P43630 455 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 PHYHD1Q5SRE7 291 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 SFXN4Q6P4A7 337 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 CORO6Q6QEF8 472 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 KLHL24Q6TFL4 600 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 SSC4DQ8WTU2 575 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 TMEM45BQ96B21 275 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 DERL3Q96Q80 235 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 SLITRK2Q9H156 845 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms