RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 LINC00346Q8IVM7 164 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 CDH26Q8IXH8 852 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 CCDC54Q8NEL0 328 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 OR6M1Q8NGM8 313 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 OR14L1PQ8NHC6 308 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 JSRP1Q96MG2 331 aaPredicted RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 FOXN4Q96NZ1 517 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 HDHD2Q9H0R4 259 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 PNRC2Q9NPJ4 139 aaKnown RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 STMN3Q9NZ72 180 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 LRFN1Q9P244 771 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 CDV3Q9UKY7 258 aaKnown RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 POLR1DQ9Y2S0 133 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 FLVCR1Q9Y5Y0 555 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 VPS13AQ96RL7 3174 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 A0A0G2JMM0 328 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 LOC100289279A0A1B0GTE1 492 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 LOC101059948A0A1B0GTJ6 334 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 A0A1W2PPB8 328 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 A0A1W2PPL8 197 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 A0A1W2PRS3 328 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 HMX3A6NHT5 357 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 KIR3DP1A8MWS1 328 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 SMAD9O15198 467 aaKnown RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 ORC5O43913 435 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 NEURL1O76050 574 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 APOC1P02654 83 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 ENPP1P22413 925 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 DDOSTP39656 456 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 GUCA1AP43080 201 aaPredicted RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 MRPS34P82930 218 aaKnown RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 SSBP1Q04837 148 aaKnown RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 SPEM2Q0P670 501 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 HYAL4Q2M3T9 481 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 SLC36A2Q495M3 483 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 PLA1AQ53H76 456 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 C1orf100Q5SVJ3 147 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 PDSS1Q5T2R2 415 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 ZNF57Q68EA5 555 aaPredicted RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 ZNF529Q6P280 563 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 ANKRD16Q6P6B7 361 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 FCRLAQ7L513 359 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 LINGO2Q7L985 606 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 DTX1Q86Y01 620 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 LYPD6Q86Y78 171 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 C20orf196Q8IYI0 205 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 ZIC4Q8N9L1 334 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 OR2V1Q8NHB1 315 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 SYNPRQ8TBG9 265 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 MED12Q93074 2177 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 CPNE4Q96A23 557 aaPredicted RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 SFXN2Q96NB2 322 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 UTP23Q9BRU9 249 aaKnown RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 TRAF4Q9BUZ4 470 aaPredicted RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 ZNF703Q9H7S9 590 aaPredicted RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 DEPPQ9NTK1 212 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 FBXL3Q9UKT7 428 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 CACNG2Q9Y698 323 aa10.6□□□□□ -0.71
PKP4-213ENST00000486254 NCOA6Q14686 2063 aaPredicted RBP10.6□□□□□ -0.71
PKP4-213ENST00000486254 PHF3Q92576 2039 aaKnown RBP10.59□□□□□ -0.71
PKP4-213ENST00000486254 A0A0B4J203 849 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 NAP1L6A6NFF2 107 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 ZNF716A6NP11 495 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 CDRT15L2A8MXV6 281 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 PRR33A8MZF0 331 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 ACOT7O00154 380 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 TNFSF11O14788 317 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 DHHO43323 396 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 EEF1E1O43324 174 aaKnown RBP10.59□□□□□ -0.71
PKP4-213ENST00000486254 XRCC3O43542 346 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 TTRP02766 147 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 ACSM4P0C7M7 580 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 TCEA1P23193 301 aaKnown RBP10.59□□□□□ -0.71
PKP4-213ENST00000486254 HSD11B1P28845 292 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 OTX1P32242 354 aaPredicted RBP10.59□□□□□ -0.71
PKP4-213ENST00000486254 CD96P40200 585 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 MAGEB1P43366 347 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 PTH2RP49190 550 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 TPTEP56180 551 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 KLF9Q13886 244 aaPredicted RBP10.59□□□□□ -0.71
PKP4-213ENST00000486254 GPR176Q14439 515 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 RAB11BQ15907 218 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 NRN1LQ496H8 165 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 CFAP77Q6ZQR2 320 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 Q6ZSR3 168 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 SPATC1Q76KD6 591 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 TOMM5Q8N4H5 51 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 OR2M7Q8NG81 312 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 OR13C3Q8NGS6 347 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 OR6N1Q8NGY5 312 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 OR6F1Q8NGZ6 308 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 HPS1Q92902 700 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 NKD1Q969G9 470 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 TMEM45BQ96B21 275 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 ORAI1Q96D31 301 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 PBOV1Q9GZY1 135 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 PAQR5Q9NXK6 330 aaPredicted RBP10.59□□□□□ -0.71
PKP4-213ENST00000486254 CNTRLQ7Z7A1 2325 aa10.59□□□□□ -0.71
PKP4-213ENST00000486254 IGKV3D-15A0A087WSY6 115 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms