RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 C20orf141Q9NUB4 165 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 NDRG3Q9UGV2 375 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 ZNF175Q9Y473 711 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 CHST2Q9Y4C5 530 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 ZNF587BE7ETH6 402 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 H7C417 338 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 SERPINA2P20848 420 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 HTR2CP28335 458 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 IRF3Q14653 427 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 SLC36A2Q495M3 483 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 VHLLQ6RSH7 139 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 OR52I2Q8NH67 350 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 RNF141Q8WVD5 230 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 HRH4Q9H3N8 390 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 OBP2BQ9NPH6 170 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 MED29Q9NX70 200 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 PLEKHB1Q9UF11 243 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-228ENST00000486227 FIGNL2A6NMB9 653 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 ERVH48-1M5A8F1 160 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 PMS2P2O95744 297 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 DBHP09172 617 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 MNX1P50219 401 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-228ENST00000486227 DEFA6Q01524 100 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 MFAP5Q13361 173 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 ZNF79Q15937 498 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 BPIFB2Q8N4F0 458 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 PLPP7Q8NBV4 271 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 FGGYQ96C11 551 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 DEFB127Q9H1M4 99 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 KCNJ16Q9NPI9 418 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 OR52A1Q9UKL2 312 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 ZFC3H1O60293 1989 aaKnown RBP9.99□□□□□ -0.81
HDAC6-228ENST00000486227 LCTP09848 1927 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 RRASP10301 218 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 BDKRB2P30411 391 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 RAB5CP51148 216 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 FXYD4P59646 89 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 H3F3CQ6NXT2 135 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 FAM199XQ6PEV8 388 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-228ENST00000486227 CRIPAKQ8N1N5 446 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 OR13C5Q8NGS8 318 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 ZNF845Q96IR2 970 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-228ENST00000486227 ISG20L2Q9H9L3 353 aaKnown RBP9.99□□□□□ -0.81
HDAC6-228ENST00000486227 ING1Q9UK53 422 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-228ENST00000486227 RP1P56715 2156 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 HYAL3O43820 417 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-228ENST00000486227 MECP2P51608 486 aaKnown RBP9.99□□□□□ -0.81
HDAC6-228ENST00000486227 CORO6Q6QEF8 472 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 OR8D4Q8NGM9 314 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 TRAF4Q9BUZ4 470 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-228ENST00000486227 HRASLSQ9HDD0 168 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 SLC52A3Q9NQ40 469 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 FBXO4Q9UKT5 387 aa9.99□□□□□ -0.81
HDAC6-228ENST00000486227 SPTBP11277 2137 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 LGALS8O00214 317 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 PLA2G10O15496 165 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 RGS11O94810 467 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 ZNF250P15622 560 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 AVPR2P30518 371 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 RAD52P43351 418 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 LPCAT3Q6P1A2 487 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 ZNF813Q6ZN06 617 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 OR1M1Q8NGA1 313 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 ST8SIA1Q92185 356 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 APH1AQ96BI3 265 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 FSCN3Q9NQT6 498 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 SMCO4Q9NRQ5 59 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 RLFQ13129 1914 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 A0A087WUJ7 227 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 A0A0B4J2E0 115 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 A0A1B0GX12 115 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 ZNF891A8MT65 544 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-228ENST00000486227 AIPO00170 330 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 B3GALNT1O75752 331 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 CBX7O95931 251 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 PEBP1P30086 187 aaKnown RBP9.98□□□□□ -0.81
HDAC6-228ENST00000486227 MMP15P51511 669 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 GLYATL3Q5SZD4 288 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 HES3Q5TGS1 186 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 BEND4Q6ZU67 534 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 MOB3CQ70IA8 216 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 TMEM200AQ86VY9 491 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 CDH26Q8IXH8 852 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 HSD17B8Q92506 261 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 MIB2Q96AX9 1013 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 SLC25A21Q9BQT8 299 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-228ENST00000486227 ZMAT3Q9HA38 289 aaKnown RBP9.98□□□□□ -0.81
HDAC6-228ENST00000486227 NIT2Q9NQR4 276 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 PCOLCE2Q9UKZ9 415 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 SIGLEC7Q9Y286 467 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 ACTL6BO94805 426 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 IGHV3-9P01782 118 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 IGHV4-34P06331 123 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 GALP22466 123 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 SLC6A1P30531 599 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 PPIAP62937 165 aaKnown RBP9.98□□□□□ -0.81
HDAC6-228ENST00000486227 PLCXD3Q63HM9 321 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 STEAP1BQ6NZ63 245 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 GPR119Q8TDV5 335 aa9.98□□□□□ -0.81
HDAC6-228ENST00000486227 SMIM4Q8WVI0 70 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms