RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 C1QTNF5Q9BXJ0 243 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 NTN4Q9HB63 628 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 PLEK2Q9NYT0 353 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 ZNF69Q9UC07 566 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 PRSS37A4D1T9 235 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 XKRYO14609 159 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 H2AFXP16104 143 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-205ENST00000485397 TUBG1P23258 451 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 SLC6A9P48067 706 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 BTG1P62324 171 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 ZMYND11Q15326 602 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 TMEM155Q4W5P6 130 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 KLF17Q5JT82 389 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-205ENST00000485397 FKBP9P1Q75LS8 142 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 CBLL1Q75N03 491 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 TSEN54Q7Z6J9 526 aaKnown RBP16.19■□□□□ 0.18
COL27A1-205ENST00000485397 OR5AS1Q8N127 324 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 BCL6BQ8N143 479 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-205ENST00000485397 KLHL36Q8N4N3 616 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 HAVCR1Q96D42 359 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 HSH2DQ96JZ2 352 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 DUX5Q96PT3 197 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 RERGLQ9H628 205 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 TUBG2Q9NRH3 451 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 PPP1R3CQ9UQK1 317 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 COA3Q9Y2R0 106 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-205ENST00000485397 POLR3KQ9Y2Y1 108 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-205ENST00000485397 AUP1Q9Y679 476 aa16.19■□□□□ 0.18
COL27A1-205ENST00000485397 TEX13CA0A0J9YWL9 993 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 AHCYL1O43865 530 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 DBHP09172 617 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 ZNF12P17014 697 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 AQP6Q13520 282 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 TUSC1Q2TAM9 212 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 CCDC92Q53HC0 331 aaPredicted RBP16.18■□□□□ 0.18
COL27A1-205ENST00000485397 ARMCX4Q5H9R4 360 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 RBMS3Q6XE24 437 aaKnown RBP16.18■□□□□ 0.18
COL27A1-205ENST00000485397 PTP4A1Q93096 173 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 FAM46AQ96IP4 442 aaKnown RBP16.18■□□□□ 0.18
COL27A1-205ENST00000485397 OR2V2Q96R30 315 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 SYT4Q9H2B2 425 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 NMNAT1Q9HAN9 279 aaPredicted RBP16.18■□□□□ 0.18
COL27A1-205ENST00000485397 ARGLU1Q9NWB6 273 aaPredicted RBP16.18■□□□□ 0.18
COL27A1-205ENST00000485397 ASH2LQ9UBL3 628 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 IL19Q9UHD0 177 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 NUP50Q9UKX7 468 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 AP3M1Q9Y2T2 418 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 PCDHGB1Q9Y5G3 927 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 INSIG2Q9Y5U4 225 aa16.18■□□□□ 0.18
COL27A1-205ENST00000485397 F5H0A9 414 aaPredicted RBP16.17■□□□□ 0.18
COL27A1-205ENST00000485397 NME4O00746 187 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 GSTA4O15217 222 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 SLC16A7O60669 478 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 PTP4A3O75365 173 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 KHDRBS3O75525 346 aaKnown RBP16.17■□□□□ 0.18
COL27A1-205ENST00000485397 SERPINA1P01009 418 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 SLC7A2P52569 658 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 KRR1Q13601 381 aaKnown RBP16.17■□□□□ 0.18
COL27A1-205ENST00000485397 DOK3Q7L591 496 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 RRM2BQ7LG56 351 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 ARPINQ7Z6K5 226 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 ATG16L2Q8NAA4 619 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 OR1F12Q8NHA8 337 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 SLC7A13Q8TCU3 470 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 PTTG3PQ9NZH4 202 aa16.17■□□□□ 0.18
COL27A1-205ENST00000485397 OR6C6A6NF89 314 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 A8MXK9 166 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 TMEM178BH3BS89 294 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 RER1O15258 196 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 SURF4O15260 269 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 ZNF205O95201 554 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 HKR1P10072 659 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 GSK3BP49841 420 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 MMP16P51512 607 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 GUCY1A3Q02108 690 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 HLXQ14774 488 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-205ENST00000485397 OR2T2Q6IF00 324 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 RP9Q8TA86 221 aaKnown RBP16.16■□□□□ 0.18
COL27A1-205ENST00000485397 ZNF420Q8TAQ5 688 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-205ENST00000485397 C1orf147Q96MC9 270 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-205ENST00000485397 COG8Q96MW5 612 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 ZNF48Q96MX3 618 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-205ENST00000485397 GCM1Q9NP62 436 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 NRIP3Q9NQ35 241 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 IL20RAQ9UHF4 553 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 SIGLEC7Q9Y286 467 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 TMEM5Q9Y2B1 443 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 ENPP4Q9Y6X5 453 aa16.16■□□□□ 0.18
COL27A1-205ENST00000485397 CEACAM18A8MTB9 384 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 SLC22A2O15244 555 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 NDUFB2O95178 105 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 GPANK1O95872 356 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 COX4I1P13073 169 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 RAC2P15153 192 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 NCK1P16333 377 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 PRTN3P24158 256 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 SDHAP31040 664 aa16.15■□□□□ 0.18
COL27A1-205ENST00000485397 MDH2P40926 338 aaKnown RBP16.15■□□□□ 0.18
COL27A1-205ENST00000485397 LSM6P62312 80 aaKnown RBP16.15■□□□□ 0.18
COL27A1-205ENST00000485397 PTCHD4Q6ZW05 846 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms