RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 PTP4A3O75365 173 aa18.22■□□□□ 0.51
USP40-215ENST00000484528 KHDRBS3O75525 346 aaKnown RBP18.22■□□□□ 0.51
USP40-215ENST00000484528 GPANK1O95872 356 aa18.22■□□□□ 0.51
USP40-215ENST00000484528 OMPP47874 163 aa18.22■□□□□ 0.51
USP40-215ENST00000484528 FXYD6P3P58550 94 aa18.22■□□□□ 0.51
USP40-215ENST00000484528 CDK5R2Q13319 367 aa18.22■□□□□ 0.51
USP40-215ENST00000484528 DGCR6Q14129 220 aa18.22■□□□□ 0.51
USP40-215ENST00000484528 C1QL2Q7Z5L3 287 aa18.22■□□□□ 0.51
USP40-215ENST00000484528 ZER1Q7Z7L7 766 aa18.22■□□□□ 0.51
USP40-215ENST00000484528 PEG10Q86TG7 708 aaKnown RBP18.22■□□□□ 0.51
USP40-215ENST00000484528 OR52J3Q8NH60 311 aa18.22■□□□□ 0.51
USP40-215ENST00000484528 ELAC2Q9BQ52 826 aaKnown RBP18.22■□□□□ 0.51
USP40-215ENST00000484528 NRIP3Q9NQ35 241 aa18.22■□□□□ 0.51
USP40-215ENST00000484528 PCDHB10Q9UN67 800 aa18.22■□□□□ 0.51
USP40-215ENST00000484528 NDUFAB1O14561 156 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 AHCYL1O43865 530 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 DBHP09172 617 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 SBK2P0C263 348 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 CENPAP49450 140 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 ACTG1P63261 375 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 DBPQ10586 325 aaPredicted RBP18.21■□□□□ 0.51
USP40-215ENST00000484528 GPR139Q6DWJ6 353 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 GLYATQ6IB77 296 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 C12orf54Q6X4T0 127 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 GLB1L2Q8IW92 636 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 ST7LQ8TDW4 575 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 C7orf34Q96L11 122 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 TSSK2Q96PF2 358 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 GPX7Q96SL4 187 aaPredicted RBP18.21■□□□□ 0.51
USP40-215ENST00000484528 WACQ9BTA9 647 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 NUAK2Q9H093 628 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 ADA2Q9NZK5 511 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 AURKCQ9UQB9 309 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 POLR1DQ9Y2S0 133 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 NPTNQ9Y639 398 aa18.21■□□□□ 0.51
USP40-215ENST00000484528 UNC119BA6NIH7 251 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 J3QLI3 93 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 RER1O15258 196 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 IGHV2-70P01814 119 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 RHCEP18577 417 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 MEP1BQ16820 701 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 CCDC92Q53HC0 331 aaPredicted RBP18.2■□□□□ 0.5
USP40-215ENST00000484528 OR5AS1Q8N127 324 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 TEX29Q8N6K0 151 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 OR1F12Q8NHA8 337 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 ITLN1Q8WWA0 313 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 GPA33Q99795 319 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 SLC6A7Q99884 636 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 FAM107BQ9H098 131 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 MYLK2Q9H1R3 596 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 C7orf69Q9H7B7 122 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 SPAG4Q9NPE6 437 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 TMEM106BQ9NUM4 274 aa18.2■□□□□ 0.5
USP40-215ENST00000484528 VSX1Q9NZR4 365 aaPredicted RBP18.2■□□□□ 0.5
USP40-215ENST00000484528 OR6C6A6NF89 314 aa18.19■□□□□ 0.5
USP40-215ENST00000484528 PPP1R3DO95685 299 aa18.19■□□□□ 0.5
USP40-215ENST00000484528 KITLGP21583 273 aa18.19■□□□□ 0.5
USP40-215ENST00000484528 TNFSF4P23510 183 aa18.19■□□□□ 0.5
USP40-215ENST00000484528 ZFP36P26651 326 aaKnown RBP18.19■□□□□ 0.5
USP40-215ENST00000484528 CDKN2AP42771 156 aaKnown RBP18.19■□□□□ 0.5
USP40-215ENST00000484528 HILS1P60008 231 aa18.19■□□□□ 0.5
USP40-215ENST00000484528 HLXQ14774 488 aaPredicted RBP18.19■□□□□ 0.5
USP40-215ENST00000484528 ADCK1Q86TW2 530 aa18.19■□□□□ 0.5
USP40-215ENST00000484528 C22orf15Q8WYQ4 148 aa18.19■□□□□ 0.5
USP40-215ENST00000484528 CMTM5Q96DZ9 223 aa18.19■□□□□ 0.5
USP40-215ENST00000484528 MED4Q9NPJ6 270 aa18.19■□□□□ 0.5
USP40-215ENST00000484528 DCAF13Q9NV06 445 aaKnown RBP18.19■□□□□ 0.5
USP40-215ENST00000484528 PTTG3PQ9NZH4 202 aa18.19■□□□□ 0.5
USP40-215ENST00000484528 OPN4Q9UHM6 478 aa18.19■□□□□ 0.5
USP40-215ENST00000484528 SAMD4AQ9UPU9 718 aaKnown RBP18.19■□□□□ 0.5
USP40-215ENST00000484528 DOCK11Q5JSL3 2073 aa18.19■□□□□ 0.5
USP40-215ENST00000484528 DCTN6O00399 190 aa18.18■□□□□ 0.5
USP40-215ENST00000484528 SEC61A1P61619 476 aaKnown RBP18.18■□□□□ 0.5
USP40-215ENST00000484528 LSM6P62312 80 aaKnown RBP18.18■□□□□ 0.5
USP40-215ENST00000484528 DPY19L2P2Q6ZN68 376 aa18.18■□□□□ 0.5
USP40-215ENST00000484528 NANPQ8TBE9 248 aa18.18■□□□□ 0.5
USP40-215ENST00000484528 ZFAND2BQ8WV99 257 aa18.18■□□□□ 0.5
USP40-215ENST00000484528 HAVCR1Q96D42 359 aa18.18■□□□□ 0.5
USP40-215ENST00000484528 OR2V2Q96R30 315 aa18.18■□□□□ 0.5
USP40-215ENST00000484528 TNFRSF1AP19438 455 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 RPS6KA3P51812 740 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 SPIBQ01892 262 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 KRT72Q14CN4 511 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 CORO6Q6QEF8 472 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 SMARCD3Q6STE5 483 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 BPIFB2Q8N4F0 458 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 OR10AD1Q8NGE0 317 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 FANK1Q8TC84 345 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 DHRS1Q96LJ7 313 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 SAMD8Q96LT4 415 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 ERMAPQ96PL5 475 aaPredicted RBP18.17■□□□□ 0.5
USP40-215ENST00000484528 FUZQ9BT04 418 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 KRCC1Q9NPI7 259 aaPredicted RBP18.17■□□□□ 0.5
USP40-215ENST00000484528 PPP1R3CQ9UQK1 317 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 LHFPL6Q9Y693 200 aa18.17■□□□□ 0.5
USP40-215ENST00000484528 GMNNO75496 209 aa18.16■□□□□ 0.5
USP40-215ENST00000484528 FOXH1O75593 365 aa18.16■□□□□ 0.5
USP40-215ENST00000484528 TXNDC12O95881 172 aa18.16■□□□□ 0.5
USP40-215ENST00000484528 TUBG1P23258 451 aa18.16■□□□□ 0.5
USP40-215ENST00000484528 GATA3P23771 443 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms