RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 STOMP27105 288 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 SDHAP31040 664 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 RGS6P49758 472 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 GSK3BP49841 420 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 RPS6KA3P51812 740 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 CTXN1P60606 82 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 PSME3P61289 254 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 SCRN3Q0VDG4 424 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 RIN1Q13671 783 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 SGCAQ16586 387 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 ZNF718Q3SXZ3 478 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 C8orf82Q6P1X6 216 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-215ENST00000484203 DNM1P34Q6PK57 102 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 ZNF584Q8IVC4 421 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 NRMQ8IXM6 262 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 ARHGAP24Q8N264 748 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 LINC00471Q8N535 108 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 NPEPL1Q8NDH3 523 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 OR51A7Q8NH64 312 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 HTRA1Q92743 480 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 NMD3Q96D46 503 aaKnown RBP5.28□□□□□ -1.56
PTCD3-215ENST00000484203 TIMD4Q96H15 378 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 LRRC37BQ96QE4 947 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 ZNF347Q96SE7 839 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 SH3GL3Q99963 347 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 ELAC2Q9BQ52 826 aaKnown RBP5.28□□□□□ -1.56
PTCD3-215ENST00000484203 MRPL37Q9BZE1 423 aaKnown RBP5.28□□□□□ -1.56
PTCD3-215ENST00000484203 BPESC1Q9GZL8 116 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 GORASP2Q9H8Y8 452 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 DECR2Q9NUI1 292 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 DCAF13Q9NV06 445 aaKnown RBP5.28□□□□□ -1.56
PTCD3-215ENST00000484203 ADA2Q9NZK5 511 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 ZNF224Q9NZL3 707 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 ATPIF1Q9UII2 106 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 ZDHHC8Q9ULC8 765 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 AURKCQ9UQB9 309 aa5.28□□□□□ -1.56
PTCD3-215ENST00000484203 A0A087WUU8 490 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 IGHV4-61A0A0C4DH41 118 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 PRSS37A4D1T9 235 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 C5orf49A4QMS7 147 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 C17orf100A8MU93 164 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 NME4O00746 187 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 IMPA2O14732 288 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 FFAR1O14842 300 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 SURF4O15260 269 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 IDH3BO43837 385 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 GPRIN2O60269 458 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 SHOX2O60902 331 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 KRT36O76013 467 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 KNG1P01042 644 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 IGHV3-13P01766 116 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 ADH4P08319 380 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 HSD17B1P14061 328 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 TNFRSF1BP20333 461 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 HOXA5P20719 270 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 TNFSF4P23510 183 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 GATA3P23771 443 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 CPT2P23786 658 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 APEX1P27695 318 aaKnown RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 CRABP1P29762 137 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 GPR6P46095 362 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 CDH15P55291 814 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 LSM6P62312 80 aaKnown RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 RUNX1T1Q06455 604 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 TOP3AQ13472 1001 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 HFEQ30201 348 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 MTX3Q5HYI7 312 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 PABPC1L2AQ5JQF8 200 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 LIPNQ5VXI9 398 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 MBNL2Q5VZF2 373 aaKnown RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 GLYATQ6IB77 296 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 RPL13AP3Q6NVV1 102 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 SLC25A47Q6Q0C1 308 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 C16orf89Q6UX73 402 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 DPY19L2P2Q6ZN68 376 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 FOXL2NBQ6ZUU3 175 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 VTCN1Q7Z7D3 282 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 PEG10Q86TG7 708 aaKnown RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 MYPOPQ86VE0 399 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 PRIMA1Q86XR5 153 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 GLB1L2Q8IW92 636 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 LRRC18Q8N456 261 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 NUDT10Q8NFP7 164 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 OR5L1Q8NGL2 311 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 MOSPD2Q8NHP6 518 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 NSMAFQ92636 917 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 HDAC2Q92769 488 aaKnown RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 RAB1CQ92928 201 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 RAB39BQ96DA2 213 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 MSI2Q96DH6 328 aaKnown RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 ELMOD3Q96FG2 381 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 NUDT11Q96G61 164 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 PYURFQ96I23 114 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 POM121L2Q96KW2 1035 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 DCLRE1CQ96SD1 692 aaKnown RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 GPX7Q96SL4 187 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-215ENST00000484203 OR2H1Q9GZK4 316 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 MYLK2Q9H1R3 596 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 SEC61A2Q9H9S3 476 aa5.27□□□□□ -1.57
PTCD3-215ENST00000484203 MAN2C1Q9NTJ4 1040 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms