RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ZNF404Q494X3 552 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 AGKQ53H12 422 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 WDR25Q64LD2 544 aaPredicted RBP10.7□□□□□ -0.7
UBR4-213ENST00000483922 OR2T2Q6IF00 324 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 UNQ6126/PRO20091Q6UXV3 157 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 VASH1Q7L8A9 365 aaPredicted RBP10.7□□□□□ -0.7
UBR4-213ENST00000483922 ZER1Q7Z7L7 766 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 SYT9Q86SS6 491 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 MUC20Q8N307 709 aaPredicted RBP10.7□□□□□ -0.7
UBR4-213ENST00000483922 ATG16L2Q8NAA4 619 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 C11orf65Q8NCR3 313 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 C19orf18Q8NEA5 215 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 TMEM239Q8WW34 195 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 PTP4A1Q93096 173 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 NEIL1Q96FI4 390 aaPredicted RBP10.7□□□□□ -0.7
UBR4-213ENST00000483922 THOC1Q96FV9 657 aaKnown RBP10.7□□□□□ -0.7
UBR4-213ENST00000483922 TBX15Q96SF7 602 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 ALG12Q9BV10 488 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 KAT8Q9H7Z6 458 aaKnown RBP10.7□□□□□ -0.7
UBR4-213ENST00000483922 NOX4Q9NPH5 578 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 POLE4Q9NR33 117 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 MIOXQ9UGB7 285 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 RIMS3Q9UJD0 308 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 HIF3AQ9Y2N7 669 aa10.7□□□□□ -0.7
UBR4-213ENST00000483922 A0A1W2PPL8 197 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 SLC22A31A6NKX4 558 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 G3V4G9 280 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 H7C1C5 153 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 PRB2P02812 416 aaPredicted RBP10.69□□□□□ -0.7
UBR4-213ENST00000483922 CRYBA1P05813 215 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 DBHP09172 617 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 COX5BP10606 129 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 ZNF26P17031 533 aaPredicted RBP10.69□□□□□ -0.7
UBR4-213ENST00000483922 TNFSF4P23510 183 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 SLC18A1P54219 525 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 RPL27P61353 136 aaKnown RBP10.69□□□□□ -0.7
UBR4-213ENST00000483922 LCN6P62502 163 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 RSPO1Q2MKA7 263 aaPredicted RBP10.69□□□□□ -0.7
UBR4-213ENST00000483922 BEAN1Q3B7T3 259 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 CCDC92Q53HC0 331 aaPredicted RBP10.69□□□□□ -0.7
UBR4-213ENST00000483922 ALG10Q5BKT4 473 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 MOGAT3Q86VF5 341 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 TMEM86BQ8N661 226 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 NPEPL1Q8NDH3 523 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 FAM110DQ8TAY7 271 aaPredicted RBP10.69□□□□□ -0.7
UBR4-213ENST00000483922 LRRC8CQ8TDW0 803 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 RBP7Q96R05 134 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 CTSZQ9UBR2 303 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 CORO2BQ9UQ03 480 aa10.69□□□□□ -0.7
UBR4-213ENST00000483922 A0A1B0GWJ7 208 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 F5H5P2 479 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 IMPA2O14732 288 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 GPR137BO60478 399 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 FSTL3O95633 263 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 IGHV4-59P01825 116 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 GSTM3P21266 225 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 MSR1P21757 451 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 CPT2P23786 658 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 CFHR2P36980 270 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 PSMB10P40306 273 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 RBM34P42696 430 aaKnown RBP10.68□□□□□ -0.7
UBR4-213ENST00000483922 OR1E2P47887 323 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 PITPNBP48739 271 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 PRSS12P56730 875 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 CTXN1P60606 82 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 PCBD1P61457 104 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 MAB21L1Q13394 359 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 FAM205BPQ63HN1 556 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 C1orf94Q6P1W5 598 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 ZNF620Q6ZNG0 422 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 Q6ZPA2 131 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 Q6ZSV7 163 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 CCDC80Q76M96 950 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 PATL1Q86TB9 770 aaKnown RBP10.68□□□□□ -0.7
UBR4-213ENST00000483922 SLC30A8Q8IWU4 369 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 OR8G5Q8NG78 346 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 PCGF1Q9BSM1 259 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 PARD6BQ9BYG5 372 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 ASH2LQ9UBL3 628 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 NDRG4Q9ULP0 352 aaKnown RBP10.68□□□□□ -0.7
UBR4-213ENST00000483922 SH3GLB1Q9Y371 365 aa10.68□□□□□ -0.7
UBR4-213ENST00000483922 DOCK11Q5JSL3 2073 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 OR6C6A6NF89 314 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 C12orf71A8MTZ7 269 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 SURF4O15260 269 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 HLA-DPB1P04440 258 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 RAC2P15153 192 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 TUBG1P23258 451 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 HTR5AP47898 357 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 BPIFB3P59826 476 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 STX1BP61266 288 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 GUCY1A3Q02108 690 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 CYP51A1Q16850 503 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 ZNF181Q2M3W8 571 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 CLEC12AQ5QGZ9 265 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 GPR157Q5UAW9 335 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 ARL9Q6T311 187 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 HDDC2Q7Z4H3 204 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 MICU2Q8IYU8 434 aa10.67□□□□□ -0.7
UBR4-213ENST00000483922 DPP10Q8N608 796 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms